Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01085 ATGAGACCGCTCCAGCCGCCACAGGGTGTGAATCCGACCACCGATCGTCCTCGTCGCCGTCCCAATCTAACTCTTCCTCTTCCGCAGCGGGACAATACGTCTTTGGCGGTTCCTCTCCCTTTGCCTCCTACCTCCTCCAACGCTGCGCCTCCTTCCACCAGTCAACTTCACAACGGCATCCGCCCGCCGGACCCTCTTCCTCAGCAGCATCAGCCTTTTAGCCTTGCGGACTTCGAGAGAGTGAGCCGAATCGGAAGTGGATGTGGAGGTACCGTCTACAAAGTGATTCACCGACCTTCTGGCCGCGTCTATGCTCTCAAGGTTATTTACGGTAACCACGAGGATGCGGTTAGGCTCCAGATGGGCCGAGAGGTCAAGATCCTTCGCGACGTTGACAATCCCTATGTGGTCAAGTGCCATGATATGTTCGATCATAACGGGGAAATCCAGGTTCTCCTTGAGTACATGGATCGGGGCTCTTTGGAAGGAACGCATATCCCTCAGGAGCACCATCTCTCTGATTTGGCTCGCCAGATTCTCAGTGGCCTCGCCTATCTCCATAGCCGCCGCATCGTCCATCGCGACATCAAGCCCTCGAATCTCCTTATCAATTCCCGAAGGCAGGTTAAGATCGCTGATTTCGGCGTCGGTCGAATCTTGGAACAGACTATGGATCCTTGCAATTCCTCAGTTGGAACTATTGCGTACATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGCCAGTACAATGGCTATGCTGGGGACATTTGGAGCTTTGGGGTTAGCATATTGGAATTCTATCTCGGACGGTTTCCTCTCGCTGTCGAGAGGCCTGGGGATTGGGCGAGCTTGATGTGCGCTATATGTATGGCTCAGCCACCGGAGGCGCCGCCCACTGCTTCGTCGGAGTTTCGCCACTTCATTGCCTGTTGTTTGCAGAGAGAGGCTCGGAGAAGATGGACTGCAGCTGCATTACTGGAACATCCGTTCATAACAACGAAAAATGGAGCGAATCAATACCAGAATCAGCCGGCTCATCACCAGAATCTTCGTCAACTGTTACCTCCTCCGCCCCTTCATCCTTCCAGCCTTTCCTGA 1104 53.71 MRPLQPPQGVNPTTDRPRRRPNLTLPLPQRDNTSLAVPLPLPPTSSNAAPPSTSQLHNGIRPPDPLPQQHQPFSLADFERVSRIGSGCGGTVYKVIHRPSGRVYALKVIYGNHEDAVRLQMGREVKILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTASSEFRHFIACCLQREARRRWTAAALLEHPFITTKNGANQYQNQPAHHQNLRQLLPPPPLHPSSLS 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9531660 9532763 - Carg06406-RA Car14g01085 160987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01085 367 ProSiteProfiles Protein kinase domain profile. 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01085 367 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Car14g01085 367 Pfam Protein kinase domain 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01085 367 MobiDBLite consensus disorder prediction 1 71 - -
Car14g01085 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00812 Car-Chr13:8898235 Car14g01085 Car-Chr14:9531660 3.12E-38 dispersed
Car14g01085 Car-Chr14:9531660 Car18g00075 Car-Chr18:394422 1.02E-91 dispersed
Car01g00020 Car-Chr1:111520 Car14g01085 Car-Chr14:9531660 0 wgd
Car12g01289 Car-Chr12:11950390 Car14g01085 Car-Chr14:9531660 4.94E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89336 PF00069 Pkinase 3.00E-60 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01085 K13413 - csv:101219669 629.402