Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g01085 | ATGAGACCGCTCCAGCCGCCACAGGGTGTGAATCCGACCACCGATCGTCCTCGTCGCCGTCCCAATCTAACTCTTCCTCTTCCGCAGCGGGACAATACGTCTTTGGCGGTTCCTCTCCCTTTGCCTCCTACCTCCTCCAACGCTGCGCCTCCTTCCACCAGTCAACTTCACAACGGCATCCGCCCGCCGGACCCTCTTCCTCAGCAGCATCAGCCTTTTAGCCTTGCGGACTTCGAGAGAGTGAGCCGAATCGGAAGTGGATGTGGAGGTACCGTCTACAAAGTGATTCACCGACCTTCTGGCCGCGTCTATGCTCTCAAGGTTATTTACGGTAACCACGAGGATGCGGTTAGGCTCCAGATGGGCCGAGAGGTCAAGATCCTTCGCGACGTTGACAATCCCTATGTGGTCAAGTGCCATGATATGTTCGATCATAACGGGGAAATCCAGGTTCTCCTTGAGTACATGGATCGGGGCTCTTTGGAAGGAACGCATATCCCTCAGGAGCACCATCTCTCTGATTTGGCTCGCCAGATTCTCAGTGGCCTCGCCTATCTCCATAGCCGCCGCATCGTCCATCGCGACATCAAGCCCTCGAATCTCCTTATCAATTCCCGAAGGCAGGTTAAGATCGCTGATTTCGGCGTCGGTCGAATCTTGGAACAGACTATGGATCCTTGCAATTCCTCAGTTGGAACTATTGCGTACATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGCCAGTACAATGGCTATGCTGGGGACATTTGGAGCTTTGGGGTTAGCATATTGGAATTCTATCTCGGACGGTTTCCTCTCGCTGTCGAGAGGCCTGGGGATTGGGCGAGCTTGATGTGCGCTATATGTATGGCTCAGCCACCGGAGGCGCCGCCCACTGCTTCGTCGGAGTTTCGCCACTTCATTGCCTGTTGTTTGCAGAGAGAGGCTCGGAGAAGATGGACTGCAGCTGCATTACTGGAACATCCGTTCATAACAACGAAAAATGGAGCGAATCAATACCAGAATCAGCCGGCTCATCACCAGAATCTTCGTCAACTGTTACCTCCTCCGCCCCTTCATCCTTCCAGCCTTTCCTGA | 1104 | 53.71 | MRPLQPPQGVNPTTDRPRRRPNLTLPLPQRDNTSLAVPLPLPPTSSNAAPPSTSQLHNGIRPPDPLPQQHQPFSLADFERVSRIGSGCGGTVYKVIHRPSGRVYALKVIYGNHEDAVRLQMGREVKILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTASSEFRHFIACCLQREARRRWTAAALLEHPFITTKNGANQYQNQPAHHQNLRQLLPPPPLHPSSLS | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 9531660 | 9532763 | - | Carg06406-RA | Car14g01085 | 160987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g01085 | 367 | ProSiteProfiles | Protein kinase domain profile. | 78 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car14g01085 | 367 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524 | |
Car14g01085 | 367 | Pfam | Protein kinase domain | 78 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car14g01085 | 367 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
Car14g01085 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 191 | 203 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car13g00812 | Car-Chr13:8898235 | Car14g01085 | Car-Chr14:9531660 | 3.12E-38 | dispersed | |
Car14g01085 | Car-Chr14:9531660 | Car18g00075 | Car-Chr18:394422 | 1.02E-91 | dispersed | |
Car01g00020 | Car-Chr1:111520 | Car14g01085 | Car-Chr14:9531660 | 0 | wgd | |
Car12g01289 | Car-Chr12:11950390 | Car14g01085 | Car-Chr14:9531660 | 4.94E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89336 | PF00069 | Pkinase | 3.00E-60 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g01085 | K13413 | - | csv:101219669 | 629.402 |