Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01146 ATGGCGGAACCAAACAATTGGAATTCGGAATCTGACGGTACAGAATTGAAAAGGGGAAATCAGAGGGATCAGAAGCACCCAATTTACAGAGGCGTACGGAAAAGGAGTTGGGGCAAATGGGTATCGGAGATCCGTCAGCCCAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACCACGGCGGAGATGGCGGCGCGTGCCCATGACGTGGCGGCACTCAGTATCAAAGGCGATTCGGCTAAGGCTATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCTCGTCCGGTGTCGTTAATGCCGAGGGATATTCAGGCGGCGGCTGCCAAGGCTGCAGCGATGGTTGATTTTGATACTACGACGACGGCGTCGTTTTCGTCGTCGAATTATGAAGGAGGGTCGGATGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAGGATATCAGAGCTGAGACGTGGAGCGAGTTTGAGTTTATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGTGGCGGCGGAAATGGATTTCTGTCCGTTGTTTGCTGATCAGAGTACCACCACTTCGGCTACCTTCAATGCCGGCGATTGGGAGTGA 603 51.91 MAEPNNWNSESDGTELKRGNQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMVDFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAAEMDFCPLFADQSTTTSATFNAGDWE 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10096742 10097344 - Carg06467-RA Car14g01146 161048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01146 200 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Car14g01146 200 ProSiteProfiles AP2/ERF domain profile. 28 87 IPR001471 GO:0003700|GO:0006355
Car14g01146 200 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00084 Car-Chr1:457098 Car14g01146 Car-Chr14:10096742 2.60E-33 wgd
Car10g00596 Car-Chr10:3011050 Car14g01146 Car-Chr14:10096742 4.67E-45 wgd
Car11g00522 Car-Chr11:2808630 Car14g01146 Car-Chr14:10096742 2.39E-39 wgd
Car12g01235 Car-Chr12:11712853 Car14g01146 Car-Chr14:10096742 5.87E-42 wgd
Car14g01146 Car-Chr14:10096742 Car05g01271 Car-Chr5:11800091 9.66E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4698 PF00847 AP2 2.50E-13 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01146 K09286 - csv:101222354 326.25