Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01160 ATGGATTTCTGGCCGGAATTTCTCGCTAACAGTTGGGGAAAAGAGTTCATAGCCGGCGGAATCGGCGGCATCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATCCGACAGCAACACTCCACCTCTGGTTCCGCCATTAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCAGCTGCCCTCTACAGAGGAATGGGTGCTCCACTCGCTTCCGTCACTTTCCAGAACGCAATTGTTTTCCAAACAAACGCCGTGCTCTGCCGAGCGTTCGATCCGGCGGTAACGGACAACCGTCCACCGTCGTACAAGGCAGTAGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCGGTGGAGCTCGTTAAGATCCGCCTTCAATTACAGGATCTGGGTACATCAAGCCACTCAGATCTGGGTTCATCTCGGCTCGGGCCGATGCAGGTTGCGAAGAACATATTCAAAACCGAAGGCTACAAAGGGCTTTACAGAGGCTTAACAATCACAATGCTAAGAGACGCTCCATCCCATTGTTTTTACTTCTGGACATACGAATTCATGAGGGAAAAGCTTCATCCCGGTTGCAGGGAGTCCGGGCAAGAGACATTGAGAACGATGCTCGTCGCCGGCGGTTTAGCCGGCGTGGCCAGTTGGGTGTGTTGTTACCCACTGGATGTGGTTAAAACCAGACTCCAAGCCCAATCGAAAATGTCGTTTCAAAAATACAGTGGAATTGTGGACTGTTTCTATAAGAGCGTGAAAGAAGAAGGGTACAGTGTGTTATGGCGGGGATTGGGAACCGCCATTGCAAGAGCTTTTGTGGTGAATGGAGCCATTTTTTCTGCTTATGAGCTGAGCTTGAGATGTCTGTCCAACAATGGAGGATTTCATGCTGAAAACACCATTTAA 930 51.29 MDFWPEFLANSWGKEFIAGGIGGIAGIVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAVTDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGTSSHSDLGSSRLGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRESGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKMSFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLSNNGGFHAENTI 309
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 10171679 10173147 - Carg06481-RA Car14g01160 161062
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car14g01160 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Car14g01160 309 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Car14g01160 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Car14g01160 309 Pfam Mitochondrial carrier protein 11 91 IPR018108 -
Car14g01160 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Car14g01160 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car14g01160 Car17g00746 CCT
Car08g00582 Car14g01160 CCT
Car01g00097 Car14g01160 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01160 Car-Chr14:10171679 Car16g01093 Car-Chr16:9384902 4.87E-50 dispersed
Car01g00097 Car-Chr1:505834 Car14g01160 Car-Chr14:10171679 0 wgd
Car14g01160 Car-Chr14:10171679 Car17g00746 Car-Chr17:6665778 3.56E-141 wgd
Car14g01160 Car-Chr14:10171679 Car08g00582 Car-Chr8:3825606 6.84E-150 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01160 K15109 - csv:101222749 592.038