Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01175 ATGGAGAATCTCAGGACTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAAAAGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTACGTTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTCGGTGCGCAACTGAGCCGAGATACAGATGGAAGCTTGAGTGCAGTAGAAACATTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAGCCTCTCCTAATTGTAGGTGTTGCAGAACCTACAATTATTATGTATACCTATTTGTACAATTTTAGCAAGGATAGGAAAGATATAGGGGGAGACCTCTTCTTGGCTTGGGCCGGATGGGTTTGCGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAATGCTTCCAGACTAATCAACAGATTTACAAGGATTGCAGGGGAGCTTTTTGGCATGTTAATCTCCGTTCTGTTCATTCAAGAAGCTATTAAGGGAGTGTTGAGTGAATTTGAAGTTCCCCATGCTGAGGATAAAAGTTTAGAGAAATATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATATTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTACGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTGCTGTACCAAGCAAAGTCCCCTCTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACAGTTGTCATGGACATGGGGAAGATACCTCCCGCATACATTTTTGCGGCCTTTATTCCTGCTGTAATGATTGCAGGACTTTATTTTTTTGATCATAGTGTTGCATCGCAGCTGGCACAGCAAAAGGAGTTTAATCTCAAGAACCCTTCTGCATACCACCATGACATCATGTTGCTGGGGTTTATGACGTTGCTTTGCGGATTAATCGGGCTTCCTCCTTCAAATGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGAAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAGGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTACGCGACTGCAATTGTTTATCCTTTATCACTTCTCAAATCTGAACTTGAGTTGCTGGAAAATGTTGCGAATAACATTCTGATCCTTTATGGTGTTGGGCAGACGACATCAGTAGTCAAAGAGCTGGAAGATTTGAAGGAGGCAATCATGAAAGGTGATACTAATCATGAAAACACTAAGGATACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTGCTGCAATCACTTCTGGTGGCAGCATCAGTGTTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTCTGGGGATATTTTGCGTACATGGCCATCGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGGCGTTACAAGGTCTTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTCCAATTTGTATATTTTCTCATTTGTTATGGAGTGACTTGGATCCCCATAGCTGGAGTGTTGTTTCCTTTGCCTTTCTTCCTCCTCATTGGCATAAGACATCGCATCCTTCCCAAGCTACTCCAACCCCGTTATTTGCAGGAGCTCGACGCAGCTGAGTATGAAGAACTAACCGGTACTCCAACTGTCTCGCTTAGCCTTTCTATCAAGGAAATGAATACCCCTCAAATGGTTAATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATCAGTTGACAACCCACAGAGGGGAGTTGAAGGTTAGAGCTAAAAGCTTCAACGAGGATAGACAGGGTCAGATCCATCCCGACTAA 2049 43.29 MENLRTPFRGIVDDIRGRKACYKQDWVDGRLSGIGILAPTAYVFFASALPVIAFGAQLSRDTDGSLSAVETLASTAICGILHSILGGQPLLIVGVAEPTIIMYTYLYNFSKDRKDIGGDLFLAWAGWVCVWTALLLFLLAIFNASRLINRFTRIAGELFGMLISVLFIQEAIKGVLSEFEVPHAEDKSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVLVWTALSFAVPSKVPSGVPRRLQSPLAWQSTSLHHWTVVMDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKNPSAYHHDIMLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKEGIKRKASDSEIYATAIVYPLSLLKSELELLENVANNILILYGVGQTTSVVKELEDLKEAIMKGDTNHENTKDTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICYGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPRYLQELDAAEYEELTGTPTVSLSLSIKEMNTPQMVNNEDEVEICDAEILDQLTTHRGELKVRAKSFNEDRQGQIHPD 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10280750 10284898 + Carg06496-RA Car14g01175 161077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01175 682 Pfam HCO3- transporter family 195 373 IPR011531 GO:0006820|GO:0016021
Car14g01175 682 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016021
Car14g01175 682 Pfam HCO3- transporter family 472 562 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00340 Car-Chr5:1957549 Car14g01175 Car-Chr14:10280750 0 dispersed
Car14g00866 Car-Chr14:5089640 Car14g01175 Car-Chr14:10280750 0 dispersed
Car12g00301 Car-Chr12:1968233 Car14g01175 Car-Chr14:10280750 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01175 K24194 - csv:101210964 1129.01