Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01193 ATGACCGACATCAGCTTAGAGGAGATCAAGAATGAGAACGTCGATCTTGAGCGTATACCCGTTGAGGAAGTGTTTGAACAACTGAAATGTACCCGAGAGGGTTTGTCCTCAGAGGAGGGGCGCCAAAGGCTTCAACTCTTTGGCCCAAATAAGCTTGAAGAGAAAAAGGAAAGTAAATTTCTTAAGTTTCTGGGGTTTATGTGGAATCCACTTTCGTGGGTTATGGAGGCTGCTGCTATCATGGCGATTGTTCTTGCCAATGGAGGGGGGCAACCACCCGACTGGCAAGATTTTGTGGGTATTACTGCTTTGCTTATTATCAATTCCACAATCAGCTTTATAGAGGAAAACAATGCAGGCAATGCTGCAGCTGCACTCATGGCAGGACTTGCACCAAAAACCAAGGTTCTTCGTGATGGAAGATGGTGTGAGGAAGAGGCTGCAATCTTAGTTCCAGGAGATGTGATTAGCGTTAAGTTAGGAGATATCATTCCAGCCGATGCTCGTTTGTTGGAAGGCGATCCGCTCAAGATTGATCAGTCAGCACTTACTGGTGAGTCTTTACCAGTGACAAGGAGCTCTGGTGATGAAGTGTTTTCTGGTTCCACTGTAAAGCAAGGGGAGATCGAGGCTGTTGTAATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCTCACTTGGTTGATAGCACAAATCAAGTGGGACACTTCCAAAAGGTGTTGACTGCCATTGGAAACTTCTGCATTTGCTCCATCGCCGTAGGGATGGTGATAGAGATAGTAGTGATGTACCCAATTCAACATCGTAGATATAGAGACGGTATTAACAATCTCTTGGTGCTACTCATTGGGGGTATCCCAATTGCCATGCCCACTGTTTTATCAGTCACTATGGCTATTGGTTCTCATAGGCTATCCCAGCAGGGTGCTATCACAAAGAGAATGACAGCCATTGAAGAAATGGCTGGAATGGATGTCCTCTGCAGTGATAAGACAGGAACTCTGACTCTCAATAAGCTTACAGTTGACAAATCCATGATTGAGGTGTTTGTTAGAGATGTGGACAAAGATACTGTGATTTTGCTTGGAGCTAGAGCTTCCAGGGTTGAGAATCAAGACGCCATTGATGCTTGCATTGTTGGGATGCTTGGTGATCCTAAGGAGGCCAGAGAAGGCATAAGGGAGGTCCATTTCTTACCCTTTAACCCCGTTGAGAAGCGCACAGCTATTACTTATATTGACAATGATGGCAATTGGCACCGTGTTAGCAAAGGAGCACCGGAGCAGATCATTGAACTTTGTGACCTTCGTGATGATGTCAAGAAGAAGGCTCATTCAATCATCGACAAATTCGCCGATCGTGGCCTTCGTTCTCTCGCTGTTGGCCGACAGACCGTTCCAGAAAAGAGCAAAGATGGTGCAGGAGGGCCATGGCAATTTGTTGGTCTCTTACCTCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACAATCCGAAGGGCACTTCATCTTGGTGTCAACGTCAAGATGATCACTGGTGACCAACTGGCCATTGGCAAGGAAACTGGCCGCAGGCTTGGAATGGGCACAAACATGTACCCATCTTCCTCACTTCTTGGACAAAGCAAGGACGAGTCATTTGGAAATTGA 1653 46.52 MTDISLEEIKNENVDLERIPVEEVFEQLKCTREGLSSEEGRQRLQLFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGQPPDWQDFVGITALLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWCEEEAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTRSSGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEIVVMYPIQHRRYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEVFVRDVDKDTVILLGARASRVENQDAIDACIVGMLGDPKEAREGIREVHFLPFNPVEKRTAITYIDNDGNWHRVSKGAPEQIIELCDLRDDVKKKAHSIIDKFADRGLRSLAVGRQTVPEKSKDGAGGPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESFGN 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10462319 10464458 + Carg06514-RA Car14g01193 161095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01193 550 Pfam Cation transport ATPase (P-type) 383 436 - -
Car14g01193 550 Pfam E1-E2 ATPase 131 308 - -
Car14g01193 550 MobiDBLite consensus disorder prediction 531 550 - -
Car14g01193 550 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Car14g01193 550 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01193 Car-Chr14:10462319 Car02g00839 Car-Chr2:6060705 0 dispersed
Car01g00149 Car-Chr1:761718 Car14g01193 Car-Chr14:10462319 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01193 K01535 - csv:101212751 1021.15