Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01220 ATGGACTTCAAGAACTCCAACACCAACTCCCCTTCCCCATCCAAGCCAAGAAGAAAGCACCAAGACCAACACCCACAACCACACCCACAAGAGCCCACAAGGTTTCTAGGCGTTCGACGACGCCCATGGGGTCGATACGCAGCTGAAATTCGAGACCCATCTACCAAAGAAAGGCATTGGCTTGGCACCTTTGACACTGCCGAGGAGGCTGCCTTGGCCTACGACCGTGCCGCTCGCTCCATGCGTGGCTCCAAAGCTCGCACCAACTTTGTCTATTCCGACATGCCTCATGGCTCATCCGTCACCACCATTATCTCCCCTGATGACTCCCAACTCTTCCCTCCAACCCCAACACCAACCCCAACCTCCCTCCCCCAAACCCAACCCAACCACCTTTGCTTCACCCTTCATGACGACCCATTCACTGCCACCTCATTCCCCGGAAACGACTGGCTCCCCGACACCGACTCTTATCAGCCCGTCACTGCCTTCATGAACACCGGTATCCCACACCACGACGCCGAGCTCCCCCCGCTTCCACCCGACGCTTCTTCTTCCTATAACGATTGTGCCACCATGATTGATTGGTCCTCTTCCTCTTCTTCCTCTTTTATCGGCTTCGATTCGAACGCGCCTTTGCCGCCCTTTCCCGATGCCAATAACGACGCGTTCGGATTCGGTTCATCGTCCAATTACTTCTACTGA 705 55.46 MDFKNSNTNSPSPSKPRRKHQDQHPQPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTPTPTSLPQTQPNHLCFTLHDDPFTATSFPGNDWLPDTDSYQPVTAFMNTGIPHHDAELPPLPPDASSSYNDCATMIDWSSSSSSSFIGFDSNAPLPPFPDANNDAFGFGSSSNYFY 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10601250 10601954 - Carg06541-RA Car14g01220 161122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01220 234 Pfam AP2 domain 35 83 IPR001471 GO:0003700|GO:0006355
Car14g01220 234 MobiDBLite consensus disorder prediction 1 41 - -
Car14g01220 234 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02152 Car-Chr4:17496597 Car14g01220 Car-Chr14:10601250 1.02E-40 dispersed
Car05g00034 Car-Chr5:182664 Car14g01220 Car-Chr14:10601250 3.72E-29 dispersed
Car14g01220 Car-Chr14:10601250 Car18g00699 Car-Chr18:8211262 2.24E-28 dispersed
Car14g01220 Car-Chr14:10601250 Car14g01461 Car-Chr14:12193545 1.67E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4703 PF00847 AP2 1.40E-13 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01220 K09286 - csv:101205393 330.872