Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g01267 | ATGATTGCGAGCTCTCTTTGCAATGCTTCTGCTAAATTTCCGTTTTGCTTCTTCAATTACTTTGTCTTCTTGTTCCCGAGTTGTGAATACTTCCTAACTCTGGCAGAAGTGATGGAGGTAGAAACGATGATGGAACATAAGAGAAGTCTATGCTCTGTTGATGAGAGCAGTCTCACTTCTCTTACATCCAAGCGACACAAGACTGGTTTTTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAGTTTTGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAGTTCCTTCATAAGCAAGTCAAGGTGTTGAGTGCTCCATATCTTCAAAGCACACCCACTGTTCAGCTGCAGGAGCAGGAGAAATGCAGCCACAGCCTGAGGAGCAAAGGTTTATGTCTCGTTCCAATCTCGTGTATTGCCGGAGTTGCAAGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTCGAGAACGCGATCTCGCCATTCGATTGA | 564 | 45.21 | MIASSLCNASAKFPFCFFNYFVFLFPSCEYFLTLAEVMEVETMMEHKRSLCSVDESSLTSLTSKRHKTGFSISSKERKDKLGERVLALQQLVSPYGKTDTASVLLEAMEYIQFLHKQVKVLSAPYLQSTPTVQLQEQEKCSHSLRSKGLCLVPISCIAGVASSNGADIWAPVKTISPKFENAISPFD | 187 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 10890305 | 10894454 | + | Carg06588-RA | Car14g01267 | 161169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g01267 | 187 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 65 | 114 | IPR011598 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car14g01267 | Car-Chr14:10890305 | Car16g00866 | Car-Chr16:6444417 | 8.29E-30 | dispersed | |
| Car14g01267 | Car-Chr14:10890305 | Car06g01427 | Car-Chr6:10174160 | 3.39E-98 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g01267 | - | - | csv:101218499 | 284.263 |