Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01287 ATGATGGAAAATTTCCCAAATTTTCCGACGACTCCATCCTCTTCAACCTCCCTCTCTCTGCAGCAAATGCTGATTTCTCGAGCTTCCGAGCTCGCCGGAATCCATGGAGGAGTCTCCGGCGGGGTTACTCTGTTGTCGGATGGAGTAGATTTGTCGGAGAAGAAGGTGGGTGTGCCGGCGGCCGGACGGGGAGGTTATGAACAGAAAAAGAAGACGTTGAGCCGGAGATTCTCTTTTCAAACAAGAAGTCAAGTTGATATTCTCGATGATGGTTATAAATGGAGAAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTACAGATGTACACACCAAGGGTGCAAAGTGAAGAAGCAAGTGCAAAGGCTAACTAGAGACGAAGGGGTGGTGGTCACAACTTATGAAGGCATCCACTCTCATCCCATTCTCAAATCGGCCGATAACTTCGAGTATATTCTGAGTCGCATGCAAATTTACGCTTCTTATTGA 504 46.83 MMENFPNFPTTPSSSTSLSLQQMLISRASELAGIHGGVSGGVTLLSDGVDLSEKKVGVPAAGRGGYEQKKKTLSRRFSFQTRSQVDILDDGYKWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPILKSADNFEYILSRMQIYASY 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10973869 10975164 + Carg06608-RA Car14g01287 161189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01287 167 SUPERFAMILY WRKY DNA-binding domain 80 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car14g01287 167 ProSiteProfiles WRKY domain profile. 83 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g01287 167 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 66 164 - -
Car14g01287 167 SMART WRKY_cls 88 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g01287 167 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 164 IPR044810 GO:0003700
Car14g01287 167 Pfam WRKY DNA -binding domain 89 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g01287 167 Gene3D WRKY domain 73 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01302 Car-Chr11:10795648 Car14g01287 Car-Chr14:10973869 2.39E-55 dispersed
Car14g00663 Car-Chr14:3662835 Car14g01287 Car-Chr14:10973869 6.13E-58 dispersed
Car14g01287 Car-Chr14:10973869 Car06g00779 Car-Chr6:6012452 8.78E-34 dispersed
Car14g01287 Car-Chr14:10973869 Car06g01414 Car-Chr6:10118646 3.12E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4707 PF03106 WRKY 1.20E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01287 - - cmo:103494564 198.749