Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01310 ATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTAATGGGCATCGACGAAGCTGGTCGAGGGCCCTGTTTTAGGTTTTCTATTTTCCTATTCGTTTTCTTCCATTTCTGCATCTTTAACACCGCTTCGATTATCTTATTTCGAGTAAAGATAAACCTAAATGAAATAGTCAGCAGATGTACTCTGCTAATGGGTTGGTTACAAGGTGTTCTAGGCGTGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTATCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTTGCAAAGGTCACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTGGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGCTCGTTATCCCCTATAGGACTAGACTCTAATCTCACAGGGAAAAACCCTGACATTTAG 654 41.9 MSSQDPLPKWASKPCVMGIDEAGRGPCFRFSIFLFVFFHFCIFNTASIILFRVKINLNEIVSRCTLLMGWLQGVLGVGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSCSLSPIGLDSNLTGKNPDI 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11121028 11123420 + Carg22421-RA Car14g01310 161212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01310 217 Pfam Ribonuclease HII 54 187 IPR024567 GO:0004523
Car14g01310 217 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 71 196 IPR024567 GO:0004523
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01308 Car-Chr14:11097521 Car14g01310 Car-Chr14:11121028 1.08E-107 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01310 K10743 - csv:101210143 287.345