Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g01313 | ATGTCTCCTGTTGCTGTGTCTTATGGCGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTAGTCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTTACTGCTGGTGATGGGTTTGTTTGTGGGCTTCTTTTGGATTCAAACCAACCTTATTGTTGGGGAAGTAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCTATGAGCAAAGGAGCTCAATATCAAGAAATCAGTGCTGGTGATTATCATCTCTGTGGACTTCGAATGCCTTTGACTGGAAGGCGTAGGAACATGTCTTTTGTGGATTGTTGGGGATATAACATGACCAGAACCTTTGAGTTTGATGGCCCTATCGAGTCGATCTCGGCAGGGTCTGAGTTCAATTGTGGACTGTTTTCTCTTAATAGAACTGTTTTCTGTTGGGGGGATGAGACAAGCAGCCGGGTGATCAGTTTGATACCTAAAGATATGAGGTTTCAAAAGATTGCCTCTGGTGGATATCATGTTTGCGGGATTCTAGAGGGCGTGAGGTCGAGAGCGTTCTGTTGGGGAAGGAGCTTAGACATTGAAGAGGAGATTTCGGTAGCATATTCGGGTGAAGGAAATGTAGACTTGGTTCCTGTTGATCCATTAGCTTCTGTTGTTGGGGGCAAGTTCCATGCCTGTGGGATCAAAAGCTCGGACCGTGGTGTGATTTGTTGGGGCTTTACAGTCAAACCGAGTACTCCGGCACCGGATGGGATTAAAGTTTACGACATTGCAGCTGGAGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTCTGCTGGGGGCTTGGATTTCCTACTTCTCTACCTTTAGCTGTCTCTCCTGGAATCTGTAAAGCAACTCCTTGTGCTCCGGGTTTCTACGAAATAAGCCAAGACAAAGCTCGGTGTAAGTCGCCGAGTTTTCATGTTTGTATGCCCTGCAGTACTGCTTGCCCTCCTGGGATGTACCAAAAATTTGAGTGTTCCTTAAAATCTGATAGGCAGTGTGAGTATAATTGTTCAAGTTGCTTTTCTGGCGAATGCATATCAAACTGTTCATCTATGATATCAAATGGTTTGTTGGTGAAGAAAAATGGTAAGCTCTGGTCTATGCAGCTGCCAGTTCTTGTAGCTGAGATTGCTTTTGCTGTGTTTTTGATAGCTATTGTGTCGATAACTGCGATCTTTTACGTTCGATACAAGCTACGGAACTGCCATTGCTCGGGAAAGGAGTTGAAGTCAAAGAAGAACAAAGTGACAGTCTCTGCCTTCCAGAAGGAAAGCTATAAAATACGTCCGGACTTAGATGAGCTGAAGATAAGGCGGGCTCAGATGTTCACCTATGAAGAACTCGAGAGAGCAACGTGTGGGTTTAAGGAAGAGTCTATTGTGGGAAAGGGGAGTTTCTCTTGTGTTTTTCGAGGTGTTTTGAAGGACGGGACGGTCGTAGCAGTCAAACGAGCTATAATGTCTCCTAATATGCAGAAGAATTCAAAAGAGTTCCACACTGAACTTGACTTGCTATCAAGATTAAACCATGCCCATTTGCTTAATCTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTGGTTTATGAGTTCATGGCTCATGGCTCCTTGTATCAGCACCTTCATGGCAAGAACGAGACCTTAAAAGAGCAATTAGATTGGATAAGAAGAGTTACAATTGCAGTTCAAGCAGCCAGGGGAATCGAATACTTGCATGGCTATGCTTGTCCTCCCGTCATTCATCGAGACATTAAGTCGTCAAACATTCTCATCGACGAAGAGCACAATGCTCGAGTTGCTGATTTTGGCTTGTCATTGTTGGGACCAACAGATAGTAGCTCTCCATTAGCTGAGCTACCAGCTGGGACACTTGGCTATCTCGATCCCGAATACTATAGACTTCATTACCTTACCACAAAGTCCGATGTGTATAGCTTTGGTGTTTTGCTACTAGAAATTCTCAGTGGTCGAAAAGCCATTGATATGCAATATGAAGAAGGTAACATAGTAGAATGGGCAGTGCCTTTGATAAGATCTGGAGATATCTCTGCAATTTTAGATCCGATATTAAAACCGCCCTCCGATATCGAAGCCTTGAAGAGGATTGCAAATGTAGCTTGCAAATGTGTGAGAATGAGAGCTAAGGAGAGGCCATCAATGGACAAAGTGACAACTGCATTAGAGCGTGCTCTCGCCCAACTGATGGGAAGTCCGTGTAACGAACAACCGATCTTACCAACCGAGGTGGTTTTAGGAAGCAGCAGACTACACAAAAAGTCATCTCAAAGATCATCGAACCGTTCAGTGTCCGAAACGGATATAGCAGAAGCTGAGGATCAAAGGTTCGAGTTCAGAGCTCCGTCGTGGATTACATTCCCAAGCGTGACATCCTCCCAGAGGAGGAAATCCTCAGTGTCAGAAGCAGATGTTGATGGAAAGAATTTGGAAGGAAGAAATGTAGGGAATTGTGGAGGTGCAGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGGGCCTGCTTCCCCTCAGGAAAAGCTGTTTTTGGAGCACAATTTCTAA | 2634 | 44.61 | MSPVAVSYGEKGPVFCGLKSDGSSLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMSKGAQYQEISAGDYHLCGLRMPLTGRRRNMSFVDCWGYNMTRTFEFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPKDMRFQKIASGGYHVCGILEGVRSRAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLASVVGGKFHACGIKSSDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCAPGFYEISQDKARCKSPSFHVCMPCSTACPPGMYQKFECSLKSDRQCEYNCSSCFSGECISNCSSMISNGLLVKKNGKLWSMQLPVLVAEIAFAVFLIAIVSITAIFYVRYKLRNCHCSGKELKSKKNKVTVSAFQKESYKIRPDLDELKIRRAQMFTYEELERATCGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGKNETLKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIRSGDISAILDPILKPPSDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNRSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEGRNVGNCGGAGDGLKSLEEEIGPASPQEKLFLEHNF | 877 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 11132889 | 11135522 | - | Carg22424-RA | Car14g01313 | 161215 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g01313 | 877 | MobiDBLite | consensus disorder prediction | 820 | 877 | - | - | |
| Car14g01313 | 877 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 604 | 616 | IPR008271 | GO:0004672|GO:0006468 | |
| Car14g01313 | 877 | MobiDBLite | consensus disorder prediction | 780 | 799 | - | - | |
| Car14g01313 | 877 | ProSitePatterns | Protein kinases ATP-binding region signature. | 485 | 507 | IPR017441 | GO:0005524 | |
| Car14g01313 | 877 | MobiDBLite | consensus disorder prediction | 780 | 796 | - | - | |
| Car14g01313 | 877 | ProSiteProfiles | TNFR/NGFR family cysteine-rich region domain profile. | 309 | 357 | IPR001368 | GO:0005515 | |
| Car14g01313 | 877 | ProSiteProfiles | Protein kinase domain profile. | 479 | 756 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Car14g01313 | 877 | Pfam | Protein tyrosine and serine/threonine kinase | 482 | 751 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car06g01399 | Car14g01313 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g00218 | Car-Chr1:1189701 | Car14g01313 | Car-Chr14:11132889 | 3.96E-75 | dispersed | |
| Car03g01116 | Car-Chr3:9063159 | Car14g01313 | Car-Chr14:11132889 | 3.79E-103 | dispersed | |
| Car04g00148 | Car-Chr4:814857 | Car14g01313 | Car-Chr14:11132889 | 5.00E-15 | dispersed | |
| Car07g00914 | Car-Chr7:5066497 | Car14g01313 | Car-Chr14:11132889 | 2.36E-48 | dispersed | |
| Car09g01094 | Car-Chr9:11105458 | Car14g01313 | Car-Chr14:11132889 | 1.12E-95 | dispersed | |
| Car14g00891 | Car-Chr14:5304384 | Car14g01313 | Car-Chr14:11132889 | 4.02E-72 | dispersed | |
| Car14g01313 | Car-Chr14:11132889 | Car11g01583 | Car-Chr11:12563543 | 2.19E-74 | dispersed | |
| Car14g01313 | Car-Chr14:11132889 | Car06g01399 | Car-Chr6:10049377 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 89342 | PF07714 | PK_Tyr_Ser-Thr | 1.50E-43 | CL0016 | Car | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g01313 | - | - | csv:101210393 | 1709.89 |