Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01317 ATGGCTAGGTCTTTTCTGCAGGTTGCTGCTACGGAAGAGGTTGCTACCCCTCTCCGAGTGGTCCAGATTGAAGGATTGGTTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCAGCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGTGTTCTTGAAGTCACTAATTGCTTTCCTTTTCCGACTCGGGAGGAGGATGAGGAGATTGAAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAATACTGTCGGATGGTATCAGTCGACCTTCTTAGGTTCATATCAGACAGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAATATTAGGCGATGTGTCTGTATAATTTATGACCCATCAAGGTCTAATCAAGGTGTCTTAGCTCTCAAAGCATTGAAGCTTTCAGATTCCTTTATGGAGCTTTACCGCAGTAACAACTTTACAGGAGAAAAGTTGAGAGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCAAATTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCGCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTCCAGCGAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCGGTCGAGCAGCAGAAGTTCCAATTCTATTATCGAAGCCTGACACGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGGAGGACGGAGAATGCGATGAGGAAAGCAGCAGGAGAAGAACCTCTCCCTGAGGAGGATCCTACAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTACTGCAATCAAATTAATGGGGTTGCTGGACAGAGTTTCAACAAGCTTCATTTGATGAAGGCTTTGCACGACAGTTGA 1002 43.31 MARSFLQVAATEEVATPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLPANPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRTENAMRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQIANYCNQINGVAGQSFNKLHLMKALHDS 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11163097 11167233 + Carg22428-RA Car14g01317 161219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01317 333 MobiDBLite consensus disorder prediction 264 290 - -
Car14g01317 333 ProSiteProfiles MPN domain profile. 21 154 IPR037518 -
Car14g01317 333 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 19 122 IPR000555 GO:0005515|GO:0008233|GO:0008237
Car14g01317 333 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 16 333 IPR027524 GO:0003743|GO:0005737|GO:0005852
Car14g01317 333 MobiDBLite consensus disorder prediction 264 278 - -
Car14g01317 333 Pfam C-terminal region of eIF3h 139 331 IPR045810 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00061 Car-Chr14:352287 Car14g01317 Car-Chr14:11163097 4.11E-06 dispersed
Car14g01317 Car-Chr14:11163097 Car06g01395 Car-Chr6:10031249 2.48E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01317 K03247 - csv:101211860 644.81