Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01325 ATGCGCAGGTGGCTTTGTTGTACTTGTCAAGTTGAGGAAGCCTACCCATTAGCAGAAAGTGAGCACCTGAAAAGCCCACGAAGTTATGGAGATGGTTATTATCGACGGGACTCGAAAGAGCCAGCTCCTGCCCCATATGAAGCACCAAAATCTCCACCTCCCATAGAAGTGCCAGCATTGTCTCTGGAAGAACTGAAAGAAAAGACAGACAACTTTGGGTCCAAGGCACTGATTGGCGAAGGATCTTATGGTCGAGTTTATTTTGCTAACTTAAACAATGGGAAATCTGTGGCGGTAAAGAAGCTGGATGTTTCCTCTGAATCCGATTCGAGTATTGACTTCTTGACTCAGGTTTCTACAGTCTCAAGGTTGAAACATGAAAATTTTGTTGAATTGCATGGATATTGTGTTGAAGGAAATCTCCGTGTACTTGCATATGAATTTGCAACTATGGGTTCTCTACACGACATATTGCATGGTAGAAAGGGAGTGCAAGGGGCACAGCCAGGTCCCGTGCTTGATTGGATACAGCGTGTGAGAATTGCCGTTGATGCAGCTCGAGGATTGGAATACTTGCACGAGAAAGTTCAACCTTCTATCATTCATAGAGATGTTAGATCCAGCAACGTGCTTCTCTTTGAAGACTTCAAAGCAAAGATTGCAGACTTTAACCTTTCAAACCAGGCTCCTGACATGGCTGCTCGACTTCATTCTACTCGAGTTTTAGGAACTTTTGGCTATCATGCTCCCGAGTATGCAATGACTGGACAGTTGACACAGAAGAGTGACGTCTACAGTTTTGGAGTCGTTCTACTCGAGCTTTTGACCGGGAGGAAACCCGTCGATCACACCATGCCTCGTGGGCAGCAGAGTCTTGTTACTTGGGCTACCCCAAGACTAAGTGAAGACAAAGTTAAACAATGCGTTGATCCAAGGCTGAAGGGTGAATATCCTCCCAAAGGAGTTGCCAAGCTGGCTGCTGTGGCAGCTCTGTGTGTCCAGTACGAAGCGGAGTTCAGGCCGAACATGAGCATCGTCGTTAAGGCTCTCCAGCCGCTTCTAAGGCCTCCTGCCCCGACTCATGCTGCGGAACCGTGA 1098 47.18 MRRWLCCTCQVEEAYPLAESEHLKSPRSYGDGYYRRDSKEPAPAPYEAPKSPPPIEVPALSLEELKEKTDNFGSKALIGEGSYGRVYFANLNNGKSVAVKKLDVSSESDSSIDFLTQVSTVSRLKHENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWIQRVRIAVDAARGLEYLHEKVQPSIIHRDVRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPRLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLRPPAPTHAAEP 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11207128 11211324 + Carg22436-RA Car14g01325 161227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01325 365 MobiDBLite consensus disorder prediction 21 54 - -
Car14g01325 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Car14g01325 365 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Car14g01325 365 MobiDBLite consensus disorder prediction 21 43 - -
Car14g01325 365 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01325 365 Pfam Protein tyrosine and serine/threonine kinase 77 350 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00069 Car14g01325 CCT
Car06g01390 Car14g01325 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00092 Car-Chr6:631776 Car14g01325 Car-Chr14:11207128 4.65E-171 dispersed
Car08g00069 Car-Chr8:404266 Car14g01325 Car-Chr14:11207128 1.02E-162 dispersed
Car08g00406 Car-Chr8:2617538 Car14g01325 Car-Chr14:11207128 8.05E-170 dispersed
Car14g00373 Car-Chr14:1861887 Car14g01325 Car-Chr14:11207128 2.38E-09 dispersed
Car14g01325 Car-Chr14:11207128 Car17g00545 Car-Chr17:5071048 0 dispersed
Car14g01325 Car-Chr14:11207128 Car06g01390 Car-Chr6:9994531 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89344 PF07714 PK_Tyr_Ser-Thr 5.70E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01325 K13436 - csv:101215403 671.003