Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01337 ATGGCCTCCGCCAACGCCGGCGTCGGTAGCGGCGGCGGCGGCGGTGGTGGTAGTGGTGGTGGTCTCACTCGGTACGGTTCCGCGCCTGGATCTCTTCTGACTTCGGCGGTGGATTCCGTGATTGGAAGTCGGCATCCAGACTCTGTTTCCTCGCTCCGTACGCCGCCGTCATTCAGTGGCCACTACTTCTCCTCCGCCGACTCCTCCCTGAAATCGTCGTCGTCCACTGCCGCTGCCGCGAGGTCGTACGGAATCCATGATTTAGCCCTAGGCGATTACTCGACGGCTAGAAATTTCAATAGCAATGGTGGTCAATCCTCTTCCTCTTCGCCGTTAGTTCGCCAGAAAAGCTCGCCGGCTGGATTCCTCAGCCATCTCTCCGTCGCCGAACGAAACGGAGGAGGGTTTTCATTGACAATGGGAGGTGGTGGGAATGGCATAGGAAGACTGAAGTCCCAAGTGAGAATGAACGGCCAAGATTCACTTTCTCAAATCTCTGAAATGAATGAAAGCTTTATGGAGGCAGCCAATTCCTGTGCCAATGGCCTTACCCCCTCTACCTTTGGCATGGACTCTTCTTGGGACACTTCCAATAACTCCATTGTCTTTGGTGCCCCTCATGCTAAAACTTCCCGGCACCATCCCGACGCGGAGTTCTTCACCACCCTCGAGTCCCAGTTTAGTATGCCGCAGACAACTCTAGAAATGGCAACTGTGGAGAGGCTGCTTCATATCCCTGAACACTCTGCTCCTTGTAAGATTCGAGCTAAGCGTGGTTGTGCCACTCATCCTCGTAGTATCGCCGAACGGGAGAGGAGAACGAGAATCAGTGGAAAATTGAAGAAACTTCAAGACCTTGTTCCCAACATGGATAAGCAAACAAGCTACTCAGACATGTTAGACTTAGCGGTGCAACACATCAAAGGTCTTCAACATCAAATTCAGATGCTTAACAAAGAAGCTGAGAGTTGCACCTGTGGAAACAAAGAATGCTTATAA 999 52.05 MASANAGVGSGGGGGGGSGGGLTRYGSAPGSLLTSAVDSVIGSRHPDSVSSLRTPPSFSGHYFSSADSSLKSSSSTAAAARSYGIHDLALGDYSTARNFNSNGGQSSSSSPLVRQKSSPAGFLSHLSVAERNGGGFSLTMGGGGNGIGRLKSQVRMNGQDSLSQISEMNESFMEAANSCANGLTPSTFGMDSSWDTSNNSIVFGAPHAKTSRHHPDAEFFTTLESQFSMPQTTLEMATVERLLHIPEHSAPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQIQMLNKEAESCTCGNKECL 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11289619 11293861 - Carg24802-RA Car14g01337 161239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01337 332 Pfam Helix-loop-helix DNA-binding domain 265 311 IPR011598 GO:0046983
Car14g01337 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 310 IPR011598 GO:0046983
Car14g01337 332 MobiDBLite consensus disorder prediction 1 25 - -
Car14g01337 332 Coils Coil 300 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00852 Car-Chr10:4906800 Car14g01337 Car-Chr14:11289619 9.01E-39 dispersed
Car14g01337 Car-Chr14:11289619 Car17g00896 Car-Chr17:7437342 9.01E-30 dispersed
Car14g01337 Car-Chr14:11289619 Car06g01377 Car-Chr6:9903653 1.29E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4708 PF00010 HLH 9.60E-09 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01337 - - bhj:120087044 463.381