Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01342 ATGGACAACGAGAAGCCCCAATGCCGTGGGGGAGGATTTCTGCACGAATCAACTCGTTACTCGGGGTTTTCATCGGCTGAAAGTAGTTTCAATGGAAAATCTGAGGCAGCCTCGTCTTCAATGTCATTGCCTCCATTGGCTCCCAGTGGTAATTCCGATTGGGGTGGTCAATCTGGCCGTGGAATGTCCACCGATTCCAATCGGTTTAGCCATGATATTAGTCGAATGCCTGAAAATCCGCGGCGAAATGTTGGTCATAGACGTGCTCATTCAGAGATTCTGACCCTCCCAGATGATATCTGTTTCGATAGTGACCTTGGTATCATTGGCGGTGGTGATGGGCCTTCTCTTTCCGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCCTCCACTGGTACTTCTGCTACTCAAGTGGGTGATTCATCTTCCTCTGTTGTAGAAGCAGCGGCTACTTCTACAGATGATATTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACATCAGCATAGCCAGTCCATGGACGGCTTGACAAACATCAAACCTGAGATGCTTGTCACGGGGTCTGAAGAAGCCTCTGCAGCTGACTCCAAGAAAGCCGTGTCAGCTGCTAAGCTTGCTGAGCTTGCGTTGATTGACCCCAAACGTGCAAAAAGGATATGGGCGAACAGACAGTCAGCTGCACGGTCAAAGGAACGAAAGATGCGGTACATTGCTGAGCTTGAAAGGAAAGTTCAAACATTGCAAACAGAGGCAACTTCCTTGTCTACTCAGTTGACTCTCTTACAGAGAGATGCAAATGGTATCACTGCCGAGAACAGTGAATTAAAGCTGCGATTGCAGACAATGGAACAGCAGGTTCACCTGCAAGATGCTTTAAATGAAGCACTGAAAGAAGAAATTCAGCATTTGAAAGTTTTGACTGGCCAAGCAATGCCGAACGGTAGATCAATCACAAACTTTGCTTCCTTTGGAGGCGGCCAACAATTCTATCCTTCAAACAATCAAGCAGTTCATACTTTGTTAACTGCGCAGCAGTTTCAGCAACTTCAAATACAATCCCAACAGCAACAGCATTTTCAGTACCAGCAGCTGCATCAGCTTCAGCAACAGCAGGCTGGAGACATCAGAATGAAACGATCCATATCTCCTCAAAGCTCAAAAGACGCTGCATCGGACACGAAGCCTCCTCCTTCCTCTTGTTGA 1230 46.75 MDNEKPQCRGGGFLHESTRYSGFSSAESSFNGKSEAASSSMSLPPLAPSGNSDWGGQSGRGMSTDSNRFSHDISRMPENPRRNVGHRRAHSEILTLPDDICFDSDLGIIGGGDGPSLSDDTEEDLLSMYLDMDKFNSSTGTSATQVGDSSSSVVEAAATSTDDIAVGLKERPRVRHQHSQSMDGLTNIKPEMLVTGSEEASAADSKKAVSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSTQLTLLQRDANGITAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAMPNGRSITNFASFGGGQQFYPSNNQAVHTLLTAQQFQQLQIQSQQQQHFQYQQLHQLQQQQAGDIRMKRSISPQSSKDAASDTKPPPSSC 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11335555 11340368 + Carg24797-RA Car14g01342 161244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01342 409 MobiDBLite consensus disorder prediction 379 409 - -
Car14g01342 409 Coils Coil 239 308 - -
Car14g01342 409 MobiDBLite consensus disorder prediction 71 87 - -
Car14g01342 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Car14g01342 409 MobiDBLite consensus disorder prediction 1 87 - -
Car14g01342 409 Pfam bZIP transcription factor 223 271 IPR004827 GO:0003700|GO:0006355
Car14g01342 409 MobiDBLite consensus disorder prediction 18 70 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01372 Car-Chr6:9863981 Car14g01342 Car-Chr14:11335555 0 dispersed
Car14g01342 Car-Chr14:11335555 Car01g01054 Car-Chr1:9925086 9.57E-21 dispersed
Car14g01342 Car-Chr14:11335555 Car06g01370 Car-Chr6:9850774 3.96E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4709 PF00170 bZIP_1 1.00E-08 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01342 - - csv:101212010 618.231