Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01350 ATGGAGAACGAGTTTTTTATGAACGATGGATGCGGTTTTTCTGGGATGGAAATTCAACCTAATGAGTTGAATTCGAGTGGGTTGTTTACTCCCAATTGGGAGAATTCGATGGATCAGAGCGATCTCTTTGAGTCTACTTTGAGTTCAATTGTGTCTTCTCCGGTGAATTCTCACGCTGGAAATGTTATCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGAGACAACTTGATGATGCGAGAATTGATCGGAAGGCTTGGGAGTATTTGCAATTCTGGTGAGATTTCGCCTCATTCTTACATTGGTGGAACGAACAATAACAGTACGAACACTTCTTGTTACAATACGCCTTTGAATTCTCCTCCCAAGCTCAATTTGTCTTCGATCGGAGGGAATTTGATTCCCCTTCATCAAAATCTGGCTCCATTTTCGGCTGATCCTGGGTTTACTGAGAGGGCTGCGAGATTTTCTTGCTTTGGGAATAGGAATCTTGCGGGCTTGAATGGCCACTTGAGTTCCAATGAAACCCTAGAATTGGGAGCTGGGATGGAATCTGGAAAGCTATCCAGAGTTTCAAGTAACAAATCCTTCAACATTGGTGGAATTGGATCCCAAATGGGGGTTCAAGAAGGCGAGCAAAGCCCAATCCAGAAGGGGAATTCCATGAGAATCCCTAACAAGAAGGTACTGAACAGGTTTTCGAAGTCTTCGACCCCTGAAAACACCGGCGATTCACCGGAGGGATCGTCGGTTTCCGAACAGATTACAGGTGGGGAATTGGGTTTCAAAGGTAAACCAGAAATCAACACTAGGAAAAGGAAATCAACACTAGCAAAAGATTTGAAGGTTGCAGGAGAGAAACATGAATCAAATGGAAAGAAAATCAAACCAGATGAAGCTTCTAAGAAGGAGATTGATGCTGCTAAAGGGAAGGCAGAGGCCAAAGATGGCTCAAAAGCTTTAGGAGTAGCAAATCCTAAGCAAAAGAATGACAATTCAAAGCCTCCAGAGCCTCCAAAGGATTATATCCATGTCAGAGCTGGAAGGGGTCAAGCAACAGATAGCCACAGTTTGGCTGAAAGAGCCCGACGAGAGAAAATCAGCAAACGGATGAAGTTTCTTCAAGATCTCGTCCCTAGTTGCAATAAGGTAACTGGGAAGGCTGTCATGCTTGATGAAATCATAAACTATGTTCAGTCTTTGCAGCGCCAAGTTGAGTTTCTTTCAATGAAATTGACCACTGTGAATCCAAGGATGGATTTGAACATGGAGACCCTTTTGCCAAAGGATATCTTCAAAGGTCCCGGTTCGTCGTCGCTAACGGTTTACCCTATGGATTCATCCATGCCCGCATTTGCATATGACTATCAATCTATGCACATGCCTCCTCTTCATAGTAGCATTTCTAATGGGACAGAGAAGCAATTCTCAGTTGCCTCATCAAGTGATCAGCATAGAAATCTAAGCGCGCAAATACCGAGTGGATACAATGAAGTCGGGAACGGAATCCAAATTTCAAAGTTCTGGGAGGATGAACTCCACACCGTAGTTCAAATGGGTTATGGACAAAACCAGCTGCAGAGTTCTAATGGCTCTATGGCTGCAGATGAGATGAAAAGTGAACGGTAA 1629 44.57 MENEFFMNDGCGFSGMEIQPNELNSSGLFTPNWENSMDQSDLFESTLSSIVSSPVNSHAGNVIGGGGGGGGGGGDNLMMRELIGRLGSICNSGEISPHSYIGGTNNNSTNTSCYNTPLNSPPKLNLSSIGGNLIPLHQNLAPFSADPGFTERAARFSCFGNRNLAGLNGHLSSNETLELGAGMESGKLSRVSSNKSFNIGGIGSQMGVQEGEQSPIQKGNSMRIPNKKVLNRFSKSSTPENTGDSPEGSSVSEQITGGELGFKGKPEINTRKRKSTLAKDLKVAGEKHESNGKKIKPDEASKKEIDAAKGKAEAKDGSKALGVANPKQKNDNSKPPEPPKDYIHVRAGRGQATDSHSLAERARREKISKRMKFLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLTTVNPRMDLNMETLLPKDIFKGPGSSSLTVYPMDSSMPAFAYDYQSMHMPPLHSSISNGTEKQFSVASSSDQHRNLSAQIPSGYNEVGNGIQISKFWEDELHTVVQMGYGQNQLQSSNGSMAADEMKSER 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11392293 11394916 + Carg24789-RA Car14g01350 161252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01350 542 MobiDBLite consensus disorder prediction 230 256 - -
Car14g01350 542 MobiDBLite consensus disorder prediction 201 343 - -
Car14g01350 542 Pfam Helix-loop-helix DNA-binding domain 355 402 IPR011598 GO:0046983
Car14g01350 542 MobiDBLite consensus disorder prediction 265 316 - -
Car14g01350 542 MobiDBLite consensus disorder prediction 201 221 - -
Car14g01350 542 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 401 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00218 Car-Chr8:1369372 Car14g01350 Car-Chr14:11392293 1.04E-79 dispersed
Car14g01350 Car-Chr14:11392293 Car17g01198 Car-Chr17:9166817 8.89E-73 dispersed
Car18g00999 Car-Chr18:10438430 Car14g01350 Car-Chr14:11392293 3.40E-44 dispersed
Car14g01350 Car-Chr14:11392293 Car06g01366 Car-Chr6:9828555 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4710 PF00010 HLH 7.10E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01350 - - cmax:111479362 991.49