Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01352 ATGGAGGACGATTTTGAGTTTCCATCTGCAAGCAATGTGGACGAGGAAATGGACATGCCTGAGGATGAAGCGGAGAGCCCGGTTCTGAAGGTTGGCGAGGAGAAGGAGATTGGGAAGAACGGGCTGAAGAAGAAACTTGTTAAAGAAGGTGAAGGATGGGAAACTCCCGACACTGGTGATGAAGTCGAAGTGCATTATACCGGAACCCTTCTTGATGGGACTAAATTCGATTCCAGCCGTGACCGAGGAACGCCTTTCAAATTCAAGCTCGGGGAAGGGCAAGTGATCAAAGGATGGGATGAAGGTATCAGAACTATGAGGAAGGGTGAAAATGCAGTATTCACGATACCCCCTGGATTAGCTTATGGAGAGTCCGGTTCTCCTCCAACTATTCCACCGAATGCTACTCTTCAATTTGATGTTGAGCTGCTTTCATGGCACAGCGTCAAAGATATCTGTCAAGATGGAGGAATCCTCAAAAAGATTCTCGTCAAAGGAGATGGGTGGGATAAACCGAAGGATCTAGACGAAGTCCTGGTTCATTACGAGGCTCGCCGTGAAGATGGTACGCTAATCTCGAAGTCTGATGGGGTTGAATTCATCGTTGAAAATGGCCACTTCTGCCCTGCTTTGGCAACAACTGTGAAAACGATGAAGAAGGGAGAGAAAGCGTTGTTAACTGTGAGGCCTCAATATGGGTTTGGGGAGTCCGGTAGGCCTGCGGTGGGAGAAGAAGGTGTTGTGCCTCCTAATGCCACGCTTCTGATAACCCTTGAATTGGTTTCTTGGAAAACTGTTATAGACATTACTAAAGATAAGAAAGTCCTGAAGAAGACTTTGAAGGAGGGAGAAGGATATGAACAACCAAATGATGGAGCAGAGGTTCAAGTGAAACTCGTCGGTAAACTAGCTGATGGGACGATCTTTGCTAAGAAGGGCGATGACGAGAAGCCTTTTGAGTTCAAAACTGACGAAGAACAAGTCATTGAAGGACTCGATTTGGCTGTGAAAAAAATGAAGAAGGGAGAAATTGCCATGGTGACTATCCATCCACAATATGCTTTTGGGTCTTCCGATTCATCTCAAGATCTTGCTGTGGTTCCTGCAAACTCAACTGTTCATTACGAAGTTGAGCTTGTCTCATTTGTCAAAGAAAAAGAATCTTGGGATCTGAAAACAGCGGAAGAGAAAATAGAAGCAGCAGGGAGAAAGAAGGAAGAAGGAAACGTATTGTTCAAAGCTGGTAAATATGCCAGAGCATCAAGCAGATATGAAAAGGCTGTGCGTTACATTGAATATGATACCTCCTTCAACGATGAGGAGAAGCAACAGTGCAAGGCACTAAAGATTTTGTGCAATCTAAACAATGCTGCTTGCAAATTGAAAGTCAAGGACTACAGGCAAGCAGAGAAGCTCTGTTCAAAGGTGTTGGAACTTGACAGTAGAAATGTGAAAGCTCTGTATAGAAGGGCTCAAGCATATATTCAACTCGTTGATCTTGATCTTGCTGAGCAGGATCTCAAGAAAGCCCTTGAGATTGACCCTGAAAACAGACAAGTGAAAATCGAACTTCGACAGCTGAAAGAGAAAGTAAGGGAATACAACAAGAGAGACGCACAATTTTATGGCAACATCTTTGCAAAAATGAGCAAGTTGGAGTCGGGGAAGGCTGCCAGTTCAGCAGTGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAG 1728 44.73 MEDDFEFPSASNVDEEMDMPEDEAESPVLKVGEEKEIGKNGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMRKGENAVFTIPPGLAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWDKPKDLDEVLVHYEARREDGTLISKSDGVEFIVENGHFCPALATTVKTMKKGEKALLTVRPQYGFGESGRPAVGEEGVVPPNATLLITLELVSWKTVIDITKDKKVLKKTLKEGEGYEQPNDGAEVQVKLVGKLADGTIFAKKGDDEKPFEFKTDEEQVIEGLDLAVKKMKKGEIAMVTIHPQYAFGSSDSSQDLAVVPANSTVHYEVELVSFVKEKESWDLKTAEEKIEAAGRKKEEGNVLFKAGKYARASSRYEKAVRYIEYDTSFNDEEKQQCKALKILCNLNNAACKLKVKDYRQAEKLCSKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDLKKALEIDPENRQVKIELRQLKEKVREYNKRDAQFYGNIFAKMSKLESGKAASSAVKQEAVPMTIDSKA 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11408176 11411630 - Carg24787-RA Car14g01352 161254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01352 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 383 IPR001179 GO:0003755
Car14g01352 575 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Car14g01352 575 MobiDBLite consensus disorder prediction 1 27 - -
Car14g01352 575 MobiDBLite consensus disorder prediction 1 22 - -
Car14g01352 575 Coils Coil 517 537 - -
Car14g01352 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 171 261 IPR001179 GO:0003755
Car14g01352 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 144 IPR001179 GO:0003755
Car14g01352 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 380 IPR001179 GO:0003755
Car14g01352 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755
Car14g01352 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755
Car14g01352 575 Pfam Tetratricopeptide repeat 484 517 IPR001440 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01007 Car-Chr7:5763826 Car14g01352 Car-Chr14:11408176 2.32E-27 dispersed
Car07g01008 Car-Chr7:5767915 Car14g01352 Car-Chr14:11408176 3.08E-19 dispersed
Car08g00220 Car-Chr8:1383084 Car14g01352 Car-Chr14:11408176 0 dispersed
Car12g00637 Car-Chr12:4287039 Car14g01352 Car-Chr14:11408176 1.45E-10 dispersed
Car14g01257 Car-Chr14:10827702 Car14g01352 Car-Chr14:11408176 5.00E-14 dispersed
Car14g01352 Car-Chr14:11408176 Car17g01202 Car-Chr17:9183307 2.99E-07 dispersed
Car19g00349 Car-Chr19:5384217 Car14g01352 Car-Chr14:11408176 1.22E-09 dispersed
Car14g01352 Car-Chr14:11408176 Car17g01201 Car-Chr17:9178519 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01352 K09571 - csv:101210041 996.112