Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01370 ATGAGAGTTGGTAAGTATGAGTTGGGGAAGACTCTTGGAGAAGGCAATTTCGGCAAGGTGAAGTTGGCCGCCGATATCCGTACCGGTCGCCGTTACGCAGTCAAGATCCTCGACAAGACTAGGATTCTCCGTCTCAACTTCTCCGACCAGATTAAGCGTGAAATAAGTACTCTCAAGCTCCTCAGGCATCCGAATGTTGTAAGACTTTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTCTGGAGTGCGCCTCTGGTGGAGAATTGTTTGATAGAATTGAATCCAAAGGTAAGATGAATGAAGCGGAAGGTCGAAGGCTCTTCCAGCAGCTTATTGATGGTCTCAGCTACTGCCATGAAAAAGGAGTTTACCACAGGGATCTCAAGCTGGAAAACGTGCTTGTTGATGATAAGGGAAACATTAAGATTTCTGATTTTGGCCTCAGTGCTTTACCACAGAATTGCAGGGAAGATGGTTTGCTGCACACTACCTGTGGAAGTCCCAACTATGTTGCACCAGAGGTTCTTGCTAACAGAGGATACAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATTTTGTATGTCATTCTTACGGGCTGTCTTCCATTCGACGAGACCAATCTATCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCGGCAGGTGCCAGAAAGTTGATAGGGAGAACTCTTGACCCCAATCCAAACACACGCATTACAATAGCAGGAATTAAAGAGAATGAGTGGTTCAAGACCGACTATAATCCTGCTTCTCCTGGTTATGACGATGAGGAGGAGGGTCCACTTGATGATCAGGATGATGCCATCTCAACGCCTGATGAGCCATCCGACGTCGAAAACAGCCCAAAATCTCCATCTATTATCAATGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTAGATCTGTCTGGTTTCTTTGAGCAAGAGGATGTTTCCGAGAGGAAGATCAGATTTACATCCAACCATTCGGCCAAGGACTTGCTAGAGAGAATCGAAATTATCGCAACGGATATGGGATTTCGAGTCCAAAAGAAAAGTGGAAAGGTAGTTGAAAGTGATGCAAGAGGTAAGATGCCAAAGAAGCCTAAGTAA 1146 44.33 MRVGKYELGKTLGEGNFGKVKLAADIRTGRRYAVKILDKTRILRLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIESKGKMNEAEGRRLFQQLIDGLSYCHEKGVYHRDLKLENVLVDDKGNIKISDFGLSALPQNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTGCLPFDETNLSLLYKKTLRGDFQIPKWLSAGARKLIGRTLDPNPNTRITIAGIKENEWFKTDYNPASPGYDDEEEGPLDDQDDAISTPDEPSDVENSPKSPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKVVESDARGKMPKKPK 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11579298 11582654 - Carg19591-RA Car14g01370 161272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01370 381 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Car14g01370 381 MobiDBLite consensus disorder prediction 270 291 - -
Car14g01370 381 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Car14g01370 381 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01370 381 MobiDBLite consensus disorder prediction 266 302 - -
Car14g01370 381 Pfam NAF domain 303 362 IPR004041 GO:0007165
Car14g01370 381 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01370 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01370 Car-Chr14:11579298 Car02g00982 Car-Chr2:6959053 2.26E-147 dispersed
Car14g01370 Car-Chr14:11579298 Car17g00372 Car-Chr17:2376557 2.85E-139 wgd
Car14g01370 Car-Chr14:11579298 Car06g01352 Car-Chr6:9681729 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89345 PF00069 Pkinase 3.60E-72 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01370 K07198 - csv:101205987 682.945