Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01381 ATGGCTGAGAGCAGGAGATATGTTCCCATTCAGCATTTAGATCTAGTACAAATACTACAAGAAGCACAAAATAGGTGGCTTCGACCAGCTGAAATATGTGAAATTCTTCGAAATTACCAAAAGTTTCAATTAGCACCGGATCCTCCAGTTCAGCCTCCAGCTGGATCCTTGTTCCTTTTTGATCGGAAAGCACTTAGATATTTTCGTAAAGATGGTCATAAATGGAGGAAGAAGAAAGATGGGAAAACTGTCAAAGAAGCCCATGAAAAGTTGAAGAGTGGAAGTGTGGATGTTCTGCATTGTTACTATGCACATGGTGAGGACAATGACAACTTCCAGCGAAGAAGTTATTGGATGCTGGATGAGCAATTAGAGCATATTGTCCTTGTGCATTACAGAGAAGTAAATGAGGGTTACAGGTCTGGCATATCTCGAGTTTCAGTTGATCCAGGGTCATTGGCTGAAGGTTGTCAAGGTGGTTCAACACCCATCTTTATGCAGGAAACTTCACTTGTTGGCTCAGTTCATACTTCAAGTCCATTAAGTCCTATGCAAACAGTGCGTTCAGAAAATGGGGGTGTGGATTCTAGTGCTAGGAATGACTCTGGAATCTCTTCTGATGTTCATCATGTGTTTAAATCCAGCATGCTGCCTGCATCTTTGCCTGCAGGTGATGTTTCAGGATCGTCTGATTTATGTGGACAAGAAATCGTGATTATTCAATCTGCCATAACTGATTCAATTACACATAAGTTAATAGATGCTAGATTGGCTTCTAGTGGCTTAGTAAAAAATATGGTAAATAGTGGGCATGGCTTGATTGCTGATGAAGAAGTACCTGCCGCAAAAGCAGTTTCTCAGAGAATTGTTCAGTGCCCAACGCTATATTTCTTGTGTCAGAAAAAGAAGCACGGTTTGATCACAGTTCCTCTATTTGGTATGTGTACTGATTCTCAGGTGGTAGACGACTCGTTTGTTCAGGTAGAAAAGACGTCCAAATATGATTTGAACCATGAAGGTTTTGGAGAACTCAAAAAACTTGACAGTTTTGGCAGATGGATGGATAAGGAAATTGGAAGAGATTGTGATGATTCTTTGATGACTTTGGACTCTGGTAATTACTGGTGTGCACTGGATGCTGGAAATGATGAGAAGGAAGTATCCAGTTTATCGCATCACATGCAGCTGGATATCGATTCACTGGGGCCTTCACTTTCCCAAGATCAGTTATTCAGTATTTCCGATTTTTCCCCAGATTGGGCATATTCTGGAAATGTAACAAAGGTCCTAATAGTTGGCTCGTTTTTGGGAAGCAAAAAACTTCCTGTAGAAACGCAGTGGGGATGCATGTTTGGGGAAGTTGAGGTTTCTGCAGAAGTTCTGTCAAACAGTGTACTTCGATGCCAAACTCCTCTGCATGCTCCAGGGCGTATTCCCTTCTATGTGACATGCTGTAATAGGCTAGCCTGCAGTGAGGTGAGAGAGTTTGAGTTTCGTGAAAAGCTACCAACCCTCTCTGTACCTAATGCTATCAAGTGTGCATCAGAAGATGAATTACGGTTTCAAATGCGTCTGACAAGGCTGTTGAATTTATGTTTAGAGGAAAAGTGGTTGGATTGCTCTATTAAAAACTGTGAGAAATGCAAAATCATAGGCTTGATGAAGTCATCCAGAAGTGATATTGCAAAATGGAGAATGATGGAAGGGATTTCTATTCCATTAATAAGTGATGGAATGAACCCTAGGGATTTTATGATCCAAACTTTGCTGGTGGACAAACTTTGTGAGTGGCTAGCATGCAAGGTTCATGAAGGAACTATGGGAACGCATGTTTTGGATGAAGAGGGCCTAGGCGTCATACATTTGGCAGCTGCACTTGGCTATGCATGGACCATAGGACCGATAATCGCTTCTGGGGTCAGTCCGAACTTCAGAGATTCGAAGGGAAGGACAGCTCTTCACTGGGCGTCTTACTTTGGGAGGGAAGAAACCGTCGCTACACTGGTTAGGTTAGGTGTTTCTCCTGGTGCCGTGGATGATCCAACTTCAGGATTTCCAGGAGGACAAACTGCTGCTGATTTGGCATCAAGTCGAGGGCATAAGGGAATTGCTGGATATTTGGCTGAAGCTGATCTTATAGCTCATTTACGTTCTTTGACTGATGGTGAAAATCTTAAGGACAACGTCAAAGAAAATGTTAACGTTGATGAAACTATTCAGACTGCAGATGTCGTATCATCGCAGTTGGCGGAAGACGAACTCCTTTCCCTCAAGGGTTCTCTCGCTGCTGTCAGGAAGTCTGTTCACGCTGCTGCCTTAATTCATGCTGCTTTCCGTGCTCGTTCATTTCGTCATAAACAATTAATGGGAAGTGACAAGGAGATGATTCATGAAGAATCAGTTGACCTAGTGGCTCTCGGAATTTTAAACAAGGCTGAAAAAATTCACTATGAGGATTATCTCCACGTTGCAGCTGTGAGGATTCAACAAAATTATCGTGGCTGGAAGGGAAGAAAAGAGTTTTTGAAGATAAGAAACCGAATTGTAAAAATCCAGGCTCATGTGAGAGGATATCAAGTTCGTAAACTGTATAGAAAGGTCATATGGACAGTTAGCATTGTAGAAAAGGCAATTCTACGCTGGAGGCGGAAAAGAGTTGGTCTGCGAGGGTTCAAAGCCGAAGGGGCAACTGGAGAAGTTGCTTCCTCGCATTCACAGGTGGAGAAAAGTGATGACTATGAGTTTCTACGAATTGGGCGCCAGCTTAAATATGCTGATGTTGAAAAGGCGCTATCCAGAGTCAAGTCCATGGCTCGTTCTCCAGAGGCTCGCCATCAGTATATGAGATTAGTAACAAAGTTTCACATTTTTAAGATTAATGATGAAGAACCCAGTGGCTCAAATGAAGATGGAAGTTCCCAAGAAATCCAGAAGGAAGAGCAGAATTTGGCTTAA 2955 42.5 MAESRRYVPIQHLDLVQILQEAQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQRRSYWMLDEQLEHIVLVHYREVNEGYRSGISRVSVDPGSLAEGCQGGSTPIFMQETSLVGSVHTSSPLSPMQTVRSENGGVDSSARNDSGISSDVHHVFKSSMLPASLPAGDVSGSSDLCGQEIVIIQSAITDSITHKLIDARLASSGLVKNMVNSGHGLIADEEVPAAKAVSQRIVQCPTLYFLCQKKKHGLITVPLFGMCTDSQVVDDSFVQVEKTSKYDLNHEGFGELKKLDSFGRWMDKEIGRDCDDSLMTLDSGNYWCALDAGNDEKEVSSLSHHMQLDIDSLGPSLSQDQLFSISDFSPDWAYSGNVTKVLIVGSFLGSKKLPVETQWGCMFGEVEVSAEVLSNSVLRCQTPLHAPGRIPFYVTCCNRLACSEVREFEFREKLPTLSVPNAIKCASEDELRFQMRLTRLLNLCLEEKWLDCSIKNCEKCKIIGLMKSSRSDIAKWRMMEGISIPLISDGMNPRDFMIQTLLVDKLCEWLACKVHEGTMGTHVLDEEGLGVIHLAAALGYAWTIGPIIASGVSPNFRDSKGRTALHWASYFGREETVATLVRLGVSPGAVDDPTSGFPGGQTAADLASSRGHKGIAGYLAEADLIAHLRSLTDGENLKDNVKENVNVDETIQTADVVSSQLAEDELLSLKGSLAAVRKSVHAAALIHAAFRARSFRHKQLMGSDKEMIHEESVDLVALGILNKAEKIHYEDYLHVAAVRIQQNYRGWKGRKEFLKIRNRIVKIQAHVRGYQVRKLYRKVIWTVSIVEKAILRWRRKRVGLRGFKAEGATGEVASSHSQVEKSDDYEFLRIGRQLKYADVEKALSRVKSMARSPEARHQYMRLVTKFHIFKINDEEPSGSNEDGSSQEIQKEEQNLA 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11622439 11632040 + Carg19602-RA Car14g01381 161283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01381 984 Pfam IQ calmodulin-binding motif 823 841 IPR000048 GO:0005515
Car14g01381 984 Pfam IQ calmodulin-binding motif 847 865 IPR000048 GO:0005515
Car14g01381 984 Pfam IPT/TIG domain 412 491 IPR002909 -
Car14g01381 984 MobiDBLite consensus disorder prediction 966 984 - -
Car14g01381 984 Pfam Ankyrin repeats (many copies) 649 707 IPR002110 GO:0005515
Car14g01381 984 ProSiteProfiles Ankyrin repeat region circular profile. 648 680 - -
Car14g01381 984 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Car14g01381 984 MobiDBLite consensus disorder prediction 961 984 - -
Car14g01381 984 ProSiteProfiles IQ motif profile. 821 850 IPR000048 GO:0005515
Car14g01381 984 MobiDBLite consensus disorder prediction 176 200 - -
Car14g01381 984 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Car14g01381 984 ProSiteProfiles Ankyrin repeat profile. 648 680 IPR002110 GO:0005515
Car14g01381 984 ProSiteProfiles IQ motif profile. 844 872 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01381 Car17g00331 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01381 Car-Chr14:11622439 Car16g00743 Car-Chr16:4680164 7.42E-58 dispersed
Car14g01381 Car-Chr14:11622439 Car19g00205 Car-Chr19:1981956 3.80E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4711 PF03859 CG-1 4.60E-49 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01381 K21596 - csv:101219268 1504.58