Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01391 ATGGACAAGAAGCTTGAAGACACAATGATGGGGTCTGAGAATTATGCCGGAAAATACTCTCCGGTGGGGTTTTCCGATGACTTCCCGGCGACTAGCTTTGGTTCTTCTAATTCCTTTGACTTATTGGGGAGTGGAATTGATTTTTACAATCCTTTATCTTCCTTGTTTGATTTGGTTTCTACGACGGCGCCGCTGCTTTCCTCACCGGCCTCCACCGTGCCGGAGTCGTCGGAGGTTGTCAATGCTCCGCCCACTCCTAATTCTTCCTCCGTTTCTTCTTACTCCAATGACGCTGCCGCCATTGATGAAGTTGACAAGAACAACACCGAGAAGCCTTCTTCTTCTAATGTGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACGAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCGTACCCTAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCATTCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATGCCACGAGGTAGTATCAGAGTCCTACCAGAATCCAATCTCGACGTTACTACCACCACCAGACTTTTATTCCAACCCAACACACCTCAACCCTTCATGTATAGCCCTCCACCCCCATTTCTAACAATCAACTCGTTGTCAACGAACCCGCGTCCTCCTTCTTCCTTCCCGCCACCACCGCCACCGCCACCGTCGTCTCAAGCTTCCGTGCTCCGGGACCATGGGCTTCTACAAGACTTGGTGCCATTGCAAATGAGGAAGGAACCAAAAGATGAAGAAAATGGATGA 903 48.95 MDKKLEDTMMGSENYAGKYSPVGFSDDFPATSFGSSNSFDLLGSGIDFYNPLSSLFDLVSTTAPLLSSPASTVPESSEVVNAPPTPNSSSVSSYSNDAAAIDEVDKNNTEKPSSSNVLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDHSTVVTTYEGQHTHQSPIMPRGSIRVLPESNLDVTTTTRLLFQPNTPQPFMYSPPPPFLTINSLSTNPRPPSSFPPPPPPPPSSQASVLRDHGLLQDLVPLQMRKEPKDEENG 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11753466 11754680 - Carg19612-RA Car14g01391 161293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01391 300 MobiDBLite consensus disorder prediction 256 272 - -
Car14g01391 300 MobiDBLite consensus disorder prediction 67 133 - -
Car14g01391 300 MobiDBLite consensus disorder prediction 232 274 - -
Car14g01391 300 MobiDBLite consensus disorder prediction 67 97 - -
Car14g01391 300 Pfam WRKY DNA -binding domain 145 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g01391 300 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01391 Car17g00350 CCT
Car14g01391 Car17g00350 ECH
Car06g01335 Car14g01391 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01391 Car-Chr14:11753466 Car17g00971 Car-Chr17:7838159 2.92E-48 dispersed
Car14g01391 Car-Chr14:11753466 Car17g00350 Car-Chr17:2214403 1.05E-74 wgd
Car14g01391 Car-Chr14:11753466 Car06g01335 Car-Chr6:9575672 1.17E-108 wgd
Car14g01391 Car-Chr14:11753466 Car08g01156 Car-Chr8:7759904 2.51E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4713 PF03106 WRKY 4.80E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01391 - - cmos:111457825 530.791