Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01419 ATGTCTACGGCGAGTTCGAGCTCTATAAGGAAAGGCGGCGAAGCTGTTCCCGACCAGTTTCCGATCGGGCTTCGTGTTCTTGTTGTGGATGATGATCCGACCTGTCTGATGATCTTGGAGAAGATGCTTCGTATTTGCCGCTATGATGTAACGAATTGTAGTCGAGCCGAGGATGCATTGTCTCTTCTCAGACGATACAAAAACGGGTTCGATATCGTTTTAAGCGATGTCCACATGCCAGACATGGATGGATTCAAACTTCTGGAATACATAGGATTAGAAATGGACTTGCCTGTAATCATGATGTCGGTGGATGACGGGAAAAACGTCGTCATGAAGGGAGTAACTCATGGTGCTTGTGACTATTTAATAAAACCTGTTCGAATTGAAGCGTTAAAGAACATATGGCAGCACGTTGTTCGTAAGCGGAAGAATGAATGGAAAGACTTGGAGCAATCGGGATGTGTCGATGATGTCGTCGATCGACAGCAGAAAACTAATGAAGATGCAGATTATTCATCGTCTGCTAATGAAGGGAGTTGGAAGAACTCAAAGAGGAGGAAGGAGGACGTAGAAGACGTCGAGGAGAGGGACGATTCATCAACCTTAAAGAAACCGAGGGTCGTTTGGTCCGTTGAGCTCCATCAACAGTTTATGGCTGCTGTTAATCAACTAGGAATTGATAAGGCTGTTCCGAAGAAGATACTCGAGTTGATGAATGTCCCTGGACTCACTAGAGAAAACGTTGCCAGCCACCTTCAGAAATATCGTTTGTACCTGAGAAGAGTAAGTGGAATCACACAACACCAGAGTAATTTAAACAACACGTTCATGAGTGCCCAAGACGTGTTTGGCTCGTCGTTGAACGGTCTTGATCTTCGAACTCTCGCTGCTGCTGGTCAGCTCCAGCCACAAAGCCTTGCTACACTTCAAGCAGCTGGATTCGGTAGGTCTACAGTGAAATCGAGCATGCCTATACCTCTTGTAGATCAAAGGAACCACATTTTTAGCTTCGAAAATCCGAAGTTGAGATTCGGTGACGAGCATCAGCGACATTTGAATGGTAGTAAATCGATGAATCTACTTCATGGAATCCCGACAACGATGGAGCCGAAACAGCTTGCTAATCTGCAGCAATCGTCGCAATCTCATGGGAACATGACAATGCAAGTTAGTACACAAGGAAGCCAATCTAGCTCTCAACCACAAGCTAGAGCACAGATTCTCAAAGAAAGTACCTCAACGAGCGTAACGAGGCTTCCACCGACATCGCAGCAGCCAATTTTGCCGAATGGAACGGCCAGTGGAGGGTACAGTGTAGTTTCACCAGCCGCAACAATGTTAAATTTCCCCGAATTGCCTGGTAATAGTTTTCCTCTTCAAAGTACCCCAGGAATGTCGAGTGTCGTACCAAAGGGAAGATTCCCCGATGATGTTAACTCGAACATTAAACGATCGGAAGGTTTTGTGCCAAACTATGATATGTTTAGGGACCTGCATCCTCAGAAGCCCCATGATTGGGACTTGCAACATGTCGGTGTGACGTTCGATACGTCTCAAGGTAGTCTCGACGTTCCACCCTCAGCTTTCGCTCACCAAGGGTATGCTGCCTCTAGCCAACAAAATGGACAAAACAGGAACACATCTACCGCAGGCAAGGCCATGTTCTTGTTGGACGAACGAAGTGACAATGGGAACGAACAAAGTATGAGCCAACAACTCGACCCTCGTTTCGTCGATGGTTCAGTGAGAGTCAAAGCTGAAAGAGCTCCTGATACGAGCAGTCAGACTGACCTTTTCTCTGAACACTTCGGTCCAGAGGACCTAATGAGTGCAGTTCTTAAGCAGCAACAGGGAAGCATTGCAGCAGCTGAAAGTGAACTGGAATGGATGTTTCATCATAACACTCCTGTTTAG 1917 46.37 MSTASSSSIRKGGEAVPDQFPIGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRRYKNGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGCVDDVVDRQQKTNEDADYSSSANEGSWKNSKRRKEDVEDVEERDDSSTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRVSGITQHQSNLNNTFMSAQDVFGSSLNGLDLRTLAAAGQLQPQSLATLQAAGFGRSTVKSSMPIPLVDQRNHIFSFENPKLRFGDEHQRHLNGSKSMNLLHGIPTTMEPKQLANLQQSSQSHGNMTMQVSTQGSQSSSQPQARAQILKESTSTSVTRLPPTSQQPILPNGTASGGYSVVSPAATMLNFPELPGNSFPLQSTPGMSSVVPKGRFPDDVNSNIKRSEGFVPNYDMFRDLHPQKPHDWDLQHVGVTFDTSQGSLDVPPSAFAHQGYAASSQQNGQNRNTSTAGKAMFLLDERSDNGNEQSMSQQLDPRFVDGSVRVKAERAPDTSSQTDLFSEHFGPEDLMSAVLKQQQGSIAAAESELEWMFHHNTPV 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11919856 11923533 - Carg19641-RA Car14g01419 161321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01419 638 MobiDBLite consensus disorder prediction 378 431 - -
Car14g01419 638 MobiDBLite consensus disorder prediction 181 199 - -
Car14g01419 638 MobiDBLite consensus disorder prediction 158 199 - -
Car14g01419 638 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Car14g01419 638 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 261 IPR017930 -
Car14g01419 638 Pfam Myb-like DNA-binding domain 207 257 IPR001005 -
Car14g01419 638 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01419 Car17g00322 CCT
Car08g01126 Car14g01419 CCT
Car14g01419 Car17g00322 ECH
Car08g01126 Car14g01419 ECH
Car06g01314 Car14g01419 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00818 Car-Chr8:5464993 Car14g01419 Car-Chr14:11919856 3.85E-23 dispersed
Car09g00371 Car-Chr9:2032866 Car14g01419 Car-Chr14:11919856 2.41E-104 dispersed
Car10g00447 Car-Chr10:2251152 Car14g01419 Car-Chr14:11919856 7.30E-77 dispersed
Car12g00045 Car-Chr12:202168 Car14g01419 Car-Chr14:11919856 1.05E-95 dispersed
Car12g01145 Car-Chr12:11098431 Car14g01419 Car-Chr14:11919856 2.33E-80 dispersed
Car13g00976 Car-Chr13:9736380 Car14g01419 Car-Chr14:11919856 9.28E-21 dispersed
Car18g01126 Car-Chr18:11214135 Car14g01419 Car-Chr14:11919856 9.21E-36 dispersed
Car20g00334 Car-Chr20:1908981 Car14g01419 Car-Chr14:11919856 3.91E-22 dispersed
Car14g01419 Car-Chr14:11919856 Car17g00322 Car-Chr17:2014483 5.04E-162 wgd
Car14g01419 Car-Chr14:11919856 Car06g01314 Car-Chr6:9404028 0 wgd
Car14g01419 Car-Chr14:11919856 Car08g01126 Car-Chr8:7621855 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4717 PF00072 Response_reg 3.90E-22 CL0304 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01419 - K14491 csv:101209013 1089.72