Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01446 ATGCTTCACGAAGCTTCAACAAAACATGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGGTAACATAGATGAAATCTGTGAGGTTTCCGACAAGTTTGAGATCCAGCCTGGACTTCAAAGGATCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCAAATGCTACCCTAGCAAACACAAATATATGCAATGGGTTAATAGGAGAAGAAATTCTTCCGACCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCCACGTCGATGCAGAGTAGTTTGTCAAACTTAAGCTGCAGTCCATCTACCCCAACATCTGAATACGATTCATACTTATCGAAATCCATGAGTGCCCCTTCCGGAAGTGAAGGTTTCCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCCGGTGAGGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGGAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTATGAAACCATCGTATTTTATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAGCCTCTGACGGTTTGGACATAGATAGTTCACATCCTCTGGATGATGGTAGCATTACTCATGAAAGATTTTCTCCTTTGAAAAACAATAGTAAAAATGCTTCAGATATCCACAGTGTATTCGAGAACCATTCATATGCCAAAGCAGGAATGACAAACTATCCTCTGAGGCATGGGGTGCTTGATAGCCTCCAGCGTGCTCTTAGTCAAGCAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTCTCTGTTGGATCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTATACACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGACGTGAGAGGAAATGGGGGACTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCACGGCTACATCATGATCATCCTGATGATCCGACAATCATTGTTGGTGGGAAAGTTAAAGGAAAACTAAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGTCGAAAAAGTTTAATGATGCTTTGATGGGTATTCTTCGAGTTCCTAGCCTAATAAGCCCTCCCTATGTTTCCACTCAACCGGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTGTTTGACTTTTTTGGCAATGAGGAAGCAGTGAACCTTGTCCGTTCATATATCTTGAGCAACCCTACTGGTGATCCTGCAAAATTTTTACTGGAGCAGCTCCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATGTAA 1557 41.94 MLHEASTKHEGELEVSFGYKCNGNIDEICEVSDKFEIQPGLQRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSMQSSLSNLSCSPSTPTSEYDSYLSKSMSAPSGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNEASDGLDIDSSHPLDDGSITHERFSPLKNNSKNASDIHSVFENHSYAKAGMTNYPLRHGVLDSLQRALSQAENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDVRGNGGLKAVQLTESHTVDNELERARLHHDHPDDPTIIVGGKVKGKLKVTRAFGVGYLKSKKFNDALMGILRVPSLISPPYVSTQPALSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVRSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSM 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12116698 12121936 + Carg20110-RA Car14g01446 161348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01446 518 ProSiteProfiles PPM-type phosphatase domain profile. 139 505 IPR001932 -
Car14g01446 518 Coils Coil 267 287 - -
Car14g01446 518 Pfam Protein phosphatase 2C 236 456 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01446 Car-Chr14:12116698 Car20g00353 Car-Chr20:1990725 4.95E-66 dispersed
Car14g01446 Car-Chr14:12116698 Car06g01288 Car-Chr6:9234751 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01446 - - bhj:120073713 910.598