Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01485 ATGGATAATTCTCCTCCCTCGCCGTTGCCGCAGCCTTTGCACGACGGCGCCGGAATGGACCTTCAACTCCCCATGCCCGACGACTCCTCCACCCCACTCTGGGACCTGGGGGATCTCCTCGACCTCGCTGCGGATGATCAGTTTTCCTTCTCTTTGGAACAGGACAATCTGCCCTCGGCCTCCTCTCATTACCTCGAGATTCAATCCCAGACTTCTCCCCCTTCCAATTCGGACCGAATTCGGAAGCGCGACCCGAGGTTGACCTGCTCAAATTTCTTGGCCGGGCGGGTTCCTTGTGCTTGTCCTGAGATTGATGCGATGCTTGAGGAGGAAGCAGCTGCCACGCCTGGTAAGAAGCGGGCTAGGACGGCGCGTGCTACGGCTGGAACTGTTCGGTGCCAAGTACCGGGGTGTGAGGTTGATATTAGCGAGCTTAAAGGTTATCATAGAAGGCATAGGGTTTGTCTTCGTTGCGCGAACGCTGCTGCTGTTGTGCTCGATGGAGAGACTAAAAGATATTGCCAGCAGTGTGGCAAGTTTCATGTTTTATCTGATTTTGATGAAGGCAAACGGAGTTGTCGAAGAAAATTAGAGCGCCACAACAATCGACGACGTAGGAAGCCTGTTGATTCTGCAGCTTCTATGGAAAGTGATCGATCAGGCGTGCCTCTGGAAGATGTTTCTTGTGATGGTGATGTAGGTAAAGATAACATTCTTTTCAATAACCAAACTGATCAGAAGGAAGTTGTGCATTTGGAGCCTGAACATGGGCTGGTAACCTCCACTGTCTGTTCAGCTCCTGACCTGCAGAATAATATGGATGGCAGGTTAACTTTATTGGCAATGGGTGAGGCTCAAGTGGATGGAGGAAAAGATAATTCTAAATCTCTTACTTCATCCTACTGCGACAACAAAAGCACATATTCATCAATGTGTCCAACTGGCCGAATATCATTCAAGCTTTATGATTGGAATCCTGCCGAGTTCCCTAGAAGACTTCGGCTCCAAGTATTTTCATCTTTACAATATTTGAATGGTTGGCTAATATGCCTGTTGAGTTGGAGGGATATATTCGGCCTGGTTGCATAA 1089 48.94 MDNSPPSPLPQPLHDGAGMDLQLPMPDDSSTPLWDLGDLLDLAADDQFSFSLEQDNLPSASSHYLEIQSQTSPPSNSDRIRKRDPRLTCSNFLAGRVPCACPEIDAMLEEEAAATPGKKRARTARATAGTVRCQVPGCEVDISELKGYHRRHRVCLRCANAAAVVLDGETKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRKPVDSAASMESDRSGVPLEDVSCDGDVGKDNILFNNQTDQKEVVHLEPEHGLVTSTVCSAPDLQNNMDGRLTLLAMGEAQVDGGKDNSKSLTSSYCDNKSTYSSMCPTGRISFKLYDWNPAEFPRRLRLQVFSSLQYLNGWLICLLSWRDIFGLVA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12330882 12332581 + Carg20149-RA Car14g01485 161387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01485 362 MobiDBLite consensus disorder prediction 1 32 - -
Car14g01485 362 ProSiteProfiles Zinc finger SBP-type profile. 130 207 IPR004333 GO:0003677
Car14g01485 362 MobiDBLite consensus disorder prediction 197 226 - -
Car14g01485 362 Pfam SBP domain 133 207 IPR004333 GO:0003677
Car14g01485 362 MobiDBLite consensus disorder prediction 63 82 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01257 Car14g01485 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01485 Car-Chr14:12330882 Car11g00199 Car-Chr11:1147373 1.46E-25 dispersed
Car14g01485 Car-Chr14:12330882 Car06g01257 Car-Chr6:9023511 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4725 PF03110 SBP 1.80E-28 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01485 - - cmos:111457700 645.58