Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01498 ATGGGTTGTGTTCTTGGAAAGTGTTTAACTTCCAGTCGCTACCCGCGGCCTTCTGACGGCGATATGACCCAATCCTGCGATGCTCCACCGTGTAGTTTAGAAGGAAAACATGTACTAACGGGAAGGTTATTGGAGTCTGTTCGTGTGCCTTCTCATAACTTCCGTTTGGAGTACTCGCTCCTGACCCAGCGCGGCTATTACCCTGATTCCCCTGATAAAGAAAACCAAGACAGCTTCTGTGTTAGTACACAAATGCGAGGTAATCCGAATATCCATTTATTTGGTGTCTTTGATGGCCATGGTCAATTCGGATCGCTGTGTTCTAATTTCGTTAAGGAGAAGATTGTGCAAATACTATGTAACGATTCTAAATTGTTGGAAGATCCTGTTAAAGCTTATAATTCGGCATTTTTGACCTTAAATGATGAATTGCGTAGTAGTGATATTGATGATTCCATGAGCGGCACTACAGCCATTACTGCTCTTGTTCTTGGGAATACCCTTTACGTTGCCAATGTGGGCGATTCGAGGGCAGTAATGGCTGTTAGAGTTGGGAATCGAATTGTTGCCGAGGATATGTCCCATGATCAAACACCATTTAGGAAGGATGAGTGCGAGAGAGTCAAGCTGGCCGGGGCTAGGGTGTTGACCATTGATCAAATTGAAGGGCTTAAAGATCCGGATATTCAAGTATGGGGTGATGAGGAGACCGAGGGAAATGATCCTCCTCGATTGTGGTTTCCTGATAGCTTGTACCCTGGTACTGCATTTACACGGAGCGTAGGAGACAGTGCAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAGGTTTCAGTAGTTGAGCTGACTCAAAACCATCTTTTCTTTGTCGTTGCAAGCGATGGAGTTTTCGAGTTCCTTACGAGCCAAACTGTTGTTGATATGGCTGCAAGGTATACCGATCCACGGGATGCATGCTCGGCTATTGCTGGAGAATCATATAAGCTATGGCTGGATCATGAAAATCGGACAGATGATATAACAATCATCATCGTTCACATCAAAGGCTTCTCTAGTTCAGGCGCTGCTGCAATTGTTGGGCAGAATGGACTCCGCATAAGCCATGCAAGTTCAGAGTGGGGAAGCTCGGAGCCCTTTTGCTCCATTAGAAGTGATTTCTCAGATCCACAGGTCTCTCAGCATGTGGGCTTGATGAACAGGAACACAGCAATTGCTGTTCCATCTCTCACGCAGTACCGACCATTGGAAGTGGAAGTGGGTTAA 1263 46.16 MGCVLGKCLTSSRYPRPSDGDMTQSCDAPPCSLEGKHVLTGRLLESVRVPSHNFRLEYSLLTQRGYYPDSPDKENQDSFCVSTQMRGNPNIHLFGVFDGHGQFGSLCSNFVKEKIVQILCNDSKLLEDPVKAYNSAFLTLNDELRSSDIDDSMSGTTAITALVLGNTLYVANVGDSRAVMAVRVGNRIVAEDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLKDPDIQVWGDEETEGNDPPRLWFPDSLYPGTAFTRSVGDSAAEKIGVTAVPEVSVVELTQNHLFFVVASDGVFEFLTSQTVVDMAARYTDPRDACSAIAGESYKLWLDHENRTDDITIIIVHIKGFSSSGAAAIVGQNGLRISHASSEWGSSEPFCSIRSDFSDPQVSQHVGLMNRNTAIAVPSLTQYRPLEVEVG 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12409636 12412526 - Carg20162-RA Car14g01498 161400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01498 420 Pfam Protein phosphatase 2C 81 323 IPR001932 -
Car14g01498 420 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Car14g01498 420 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01063 Car14g01498 CCT
Car14g01498 Car17g00262 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01498 Car-Chr14:12409636 Car01g01358 Car-Chr1:12004334 6.36E-32 dispersed
Car01g00074 Car-Chr1:417749 Car14g01498 Car-Chr14:12409636 0 transposed
Car14g01498 Car-Chr14:12409636 Car17g00262 Car-Chr17:1625720 0 wgd
Car14g01498 Car-Chr14:12409636 Car08g01063 Car-Chr8:7266066 3.46E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01498 - - cmax:111480068 829.706