Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01563 ATGTATACATACCACGTTGGCCGGGGTCATGTGGTTGGTCGGAGGAGTGGAAGATTGATTTTTCTAAACTCGATATCCAGAAAGTTGTTGCTCACGGGACTTATAGAACTGTATTCAGAGGAACATATGACAACCAAGATGTCACAGATAAACATCCTTTTCGCTTTTGATTTTGCTTCTGCTGCTTACATTCCGACAGTGAAGATATTGGAGTGGGGGGATGGCCCTGTTTTGAGGGAATCATTTCGGCAAAAAGTTGATGCTTGGCACAAGCTTCACCATCCTAATGTTACGAAATTTGTTGGGGCTTCAACAAAAGCTATAAGTCTTCAGATTCCTTCAAAATCAAAAGTCTCTTCAATGAATCATCAAAACTCCATTTCACCTACGGATTGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAAGAGTTGTTGATGAAGCACAACAAAAAGAAACTTCCCTTCAAGGATGCCATTCACTTAGCTTTGGATCTCTCTAGAGGGCTAAGCTATCTACACTCCAACAACATTGTGCATCAAGATGTCAAACCTGAAAATATGTTGATAGATGCTCAAAGAACTCTTAAAATTGCTGATATTGGGGTTGCACGTGTTAAAGCTCGGAATCCAAATGATATGACTGGGGAATTAACTAGTACTCTCGAATACATTGCCCCAGAGGTCATTGAAGGGAAGCCATACAATAAAAGATGTGATAATCTGCGACCCGATATCCCGGAATGCTGTCCAAATTCTCTGGCAAAAGTGATGAGGAAGTGCTGGGATAGAAATCCATCCAAACGCCCTGAAATGCATAAGGTTGTCGAAATGTTGGAAGCCATTGAAAAAAGTAAAGGAGAGGGGATGGTTTCTCCTAACAAAGTCTCTTGCAGCTTCTGTTTCAGCCCTTTCGGCACGCCCAGTGCAATGGATTCGAAAGGAAATGATGTGGAGCTGTATGGCCTTCTTATTATGGGAAGCGATCAATATCCGCAATATATACTACAGGCGGGCTCGGAACGCCCCTGGTCCGAGGAATGGGAGATTGATTTTTCTAAACTTGATATCCAAAAAATATTGGACTGGGGGGATGGCCTTGTTTTGAGGGAATTTTTTCGGCATAGAGTTGATGTTTGGCACAAGCTTCACCATCCTAATGTTACAAAATTTGTTGGGGCTTCAACAAAAGCTAGAAATCTTCAGATTCCTTCAAAACTCTCTTCAATGGATCATCAAAGCTCCATTTCACCCACGGCTTGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAATAGAGTTTTTGATTAGGAACAGGAAAAGGAAACTCCCCTTTAAGGATGCCATTCAATTAGCTTTGGATCTCTCTAGAGGGCTTAGCTATCTACACTCCAACAAGATTATGCATCATGATGTCAGAACTGTAAATATGTTGATAGATGCCCACAGAACCCTTAAAATTGCTGATATTGGAGCTGCTCGTGTTAAAGCTTGGAATCCAAGAGATATGAATGGAAAAACTGGTACCGTTGAATACATGGCCCCAGAGATTCGTAAAGGGAAACCGTACAATATAACATGTGATGTCTATAGCTTCGGCATTTGCTTGTGGGAAATTTACTGCTGCGCCATGCCATACCCCAATCTTAGTTTCGCTGACATATCATCTGGAGTTGTTCATCAGAATCTGCGACCCATTATTCCGGAGTGCTGCCCAAATTCTCTGGCAAACGTGATGAGGAAATGCTGGGATGGCAACCCATCCGAACGCCCTGCAATGCATGAGGTTGTCGAAATGTTGGAAGCTATAGATACGAGTCAGGGAGGGGGAATGGTTTCTCCTGACCAACGCCAATGGCGCTTCTATGATTTTCGTTCTACTTCGTCGCCTTCGCCTCCTTACCGGCTGTTTCATGGTCGTCTTTCATCAACATTTACCCACTCGATCTTCAACTCTTCCTCTTTCCGGCAAGGGCTCCTTTTAGGGCATGCGTTCTTGCTTCGTCTGGGCTCCTTCTGCGGGTCGATTTTGGTGAGAGCAATGGGTTCGAAAGGAAATGATATGGGGGGCACTACGATCCCAAAGGAGACACAGAACCAGGATAGAACTCCGAACTCAAAGGTGGCTGGTATGGGAAGCATTAGCAGCAAAGATATGGTATTCAGAGCAGATATGATAGATTTGAAAACCCTAGATATGCAGCTGGAGAAACACTTTAGCCGTGTTTGGTCAATGACCCAGAATCAAAGGCCCAAGGAGGAGTGGGAGATTGATTTGTCTAAGCTTGACATTCAAAAAGTTATTGCTCATGGGACTTACGGGACAGTATATAAGGGTGCATATGACAACAAAAAGGTTGCAGTGAAACTGTTGGACTGGGGGGAGGATGGTCTTGCCACTACTGCTGAAACTGCTGCTCTGCGGGCATCGTTTCGGCAAGAGGTTGCTGTTTGGCACAAGCTTGAACATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGTGCTACGAATCTTAAGATTCCTTCAACGGAGGATCAAAATTCACTTCCATCTAGGGCCTGTTGTGTTGTTGTTGAGTATATTCCTTGTGGAACATTAAAACAATTATTGATAAGGCACAAGAAAAGGAAACTTCCCTTTAAGGATGTGGTTCAGTTAGCTTTGGATCTCTCCAGAGGGCTTAGCTATCTACACTCCAAGAAGATTGTGCATCGTGATGTCAAAACTGAAAATATGTTGATAGGTGCTCACAGATCTCTCAAAATTGCCGACTTTGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTTGAAGGGAAGCCATACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTGTGGGAAATTTACTGCTGCGATATGCCATACCCCAATCTTAGTTTCGTTGATGTGTCATCTGCAGTTGTTCGACAAAATCTGCGGCCCAGTATTCCGAAATGTTGCCCAAATTCTCTGGCAAATGTGATGAGGAAATGCTGGGATAGCAATCCATCCAAGCGCCCTGAAATGCATGAGGTTGTGAAAATGTTGGAAGCTATTGATACAAGTAAAGGAGGGGGGATGATTACTCGTGAGTACTTCTTTGGTTGCTTCTGTTTCAGGCCTTTCCACAGGCTCCGTGGTCCATAA 3219 43.74 MYTYHVGRGHVVGRRSGRLIFLNSISRKLLLTGLIELYSEEHMTTKMSQINILFAFDFASAAYIPTVKILEWGDGPVLRESFRQKVDAWHKLHHPNVTKFVGASTKAISLQIPSKSKVSSMNHQNSISPTDCCVVVEYLPGGTLKELLMKHNKKKLPFKDAIHLALDLSRGLSYLHSNNIVHQDVKPENMLIDAQRTLKIADIGVARVKARNPNDMTGELTSTLEYIAPEVIEGKPYNKRCDNLRPDIPECCPNSLAKVMRKCWDRNPSKRPEMHKVVEMLEAIEKSKGEGMVSPNKVSCSFCFSPFGTPSAMDSKGNDVELYGLLIMGSDQYPQYILQAGSERPWSEEWEIDFSKLDIQKILDWGDGLVLREFFRHRVDVWHKLHHPNVTKFVGASTKARNLQIPSKLSSMDHQSSISPTACCVVVEYLPGGTLIEFLIRNRKRKLPFKDAIQLALDLSRGLSYLHSNKIMHHDVRTVNMLIDAHRTLKIADIGAARVKAWNPRDMNGKTGTVEYMAPEIRKGKPYNITCDVYSFGICLWEIYCCAMPYPNLSFADISSGVVHQNLRPIIPECCPNSLANVMRKCWDGNPSERPAMHEVVEMLEAIDTSQGGGMVSPDQRQWRFYDFRSTSSPSPPYRLFHGRLSSTFTHSIFNSSSFRQGLLLGHAFLLRLGSFCGSILVRAMGSKGNDMGGTTIPKETQNQDRTPNSKVAGMGSISSKDMVFRADMIDLKTLDMQLEKHFSRVWSMTQNQRPKEEWEIDLSKLDIQKVIAHGTYGTVYKGAYDNKKVAVKLLDWGEDGLATTAETAALRASFRQEVAVWHKLEHPNVTKFVGASMGATNLKIPSTEDQNSLPSRACCVVVEYIPCGTLKQLLIRHKKRKLPFKDVVQLALDLSRGLSYLHSKKIVHRDVKTENMLIGAHRSLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLEGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFVDVSSAVVRQNLRPSIPKCCPNSLANVMRKCWDSNPSKRPEMHEVVKMLEAIDTSKGGGMITREYFFGCFCFRPFHRLRGP 1072
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12783184 12794482 - Carg23500-RA Car14g01563 161465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01563 1072 ProSitePatterns Tyrosine protein kinases specific active-site signature. 471 483 IPR008266 GO:0004672|GO:0006468
Car14g01563 1072 Pfam Protein tyrosine and serine/threonine kinase 375 604 IPR001245 GO:0004672|GO:0006468
Car14g01563 1072 Pfam Protein tyrosine and serine/threonine kinase 767 1040 IPR001245 GO:0004672|GO:0006468
Car14g01563 1072 Pfam Protein tyrosine and serine/threonine kinase 243 281 IPR001245 GO:0004672|GO:0006468
Car14g01563 1072 ProSiteProfiles Protein kinase domain profile. 322 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01563 1072 Pfam Protein kinase domain 80 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01563 1072 ProSiteProfiles Protein kinase domain profile. 6 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01563 1072 MobiDBLite consensus disorder prediction 691 715 - -
Car14g01563 1072 ProSiteProfiles Protein kinase domain profile. 766 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01563 1072 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Car14g01563 1072 MobiDBLite consensus disorder prediction 694 715 - -
Car14g01563 1072 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01199 Car14g01563 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01563 Car-Chr14:12783184 Car05g00693 Car-Chr5:4686215 3.40E-35 dispersed
Car14g01563 Car-Chr14:12783184 Car17g01130 Car-Chr17:8673176 1.68E-85 wgd
Car14g01563 Car-Chr14:12783184 Car06g01199 Car-Chr6:8767005 3.43E-99 wgd
Car14g01563 Car-Chr14:12783184 Car08g00296 Car-Chr8:1895137 4.35E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89351 PF07714 PK_Tyr_Ser-Thr 7.50E-60 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01563 - - csv:101218975 625.55