Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01569 ATGGGTAATGAAGAGATTGAGAGCCCTCACCGTGTGGCCATTCCTCCGACCAAGCCGTTCTTGGTGTCCTTAGGCGCCAATCTCAAAGAGACCTTCTTCCCCGATGACCCTTTCAAACAGTTCAAAAACCAGCCCATAGGAGCCCAGATTCTTCTCTGGCTTAAATACTTTATCCCCTTCCTCGAATGGGCTCCTCGCTACACCTTCAATTTCTTTAAAGCCGACCTCGTTGCCGGCATCACCATCGCCAGTTTGGCCGTCCCTCAGGGCATCAGCTATGCCAATCTTGCCACCATCCCCCCCATCATTGGCCTTTATTCCAGCTTTGTGCCGCCATTGATATACGCCATGCTTGGAAGCTCCAAAGATTTGGCGGTGGGGACTGTGGCGGTGGTGTCGCTTCTCATGTCCGCCCTATTGGGGAAGGAAGTCAGCCCGGTGGAGCATCCCAAGGAATATGTGCAATTGGTTTTCACTGCCACTTTCTTCGCCGGAGCTTTTCAGGCCTCTCTCGGCTTTCTCAGACTAGGGGTTATTGTGGACTTTCTGTCGCATGCAGCGATTGTGGGGTTCATGGGTGGTGCGGCGACGGTGGTTTGTCTTCAGCAGCTAAAAGGCATAATGGGATTGGTTCATTTCACGCATGAGACTGATGTTGTATCCGTCACGCGCTCTCTTTTCTCCCAAATTCATCAGTGGAGATGGCAAAGTGTAGTGTTGGGTTGCAGTTTTCTCTCCTTTCTCCTCCTCACCAGATACTTGAGCAAGAAGAAACCAATCTTCTTTTGGATAAATGCATTGGCGCCTTTGCTTTCCATCATCTTGGGAAGTCTTCTCGTCTACTTCACCCACGCTGAACGCCATGGAGTTCAAGTGATTGGGATTTTGAAGAAAGGGTTGAATCCCTTATCTGTATCTGATTTAGTATTTGGGCGCCCTCATCTTCCCATTGCCATCAAAACAGGGATCATCATCGGAATCATAGGCCTCGCTGAAGGAGTTGCCGTGGGGAGAAGTTTTGCTACACTTAAGAACTACCACATTGATGGAAACAAGGAGATGATTGCATTTGGGTTGATGAACATTGTTGGTTCTTGCACTTCTTGCTACCTTACTGCAGGGCCATTTTCGAGGACTGCAGTGAATTTCAATGCAGGATGTAAAACTGCGGTCTCCAATATTGTCATGGCAATGTCTTTGATGATCACTCTGTTGTTTTTGACGCCATTTTTTCGTTACACACCCTTGGCGGTGCTTTCCTCCATAATCATCACGGCTGTGATTGGCCTAATCAACTATGAAGAGGTCATCCACCTTTGGAAAATCGACAAATTCGACTTTGTCGTCTGCATCGGTGCATACATCGGTGTCGTCTTTGGCAGTATTGAAACGGGCTTGATCGTTGCAATTACAATCTCTTTGTTAAGGGTGCTTCTCGTCACCGCAAGGCCAAGAACTTCAATATTAGGCAACATTCCCAACTCCACAATTTACAGAAGCATTGATCAATACCCAACAGCTAACCGTGTGCCTGGAGCTCTCATCCTTCAATTGGAGGCCCCAATCTATTTTGCCAACTCAAACTACGTGAGAGAGAGGCTTTCAAGGTGGATCACAGACGAAGAAAAAAGGATAAAATCATCAGGCCTAACCAGCTTGCAGTACATAATTCTAGACGTTTCCGGCGTAAGCAGCATTGACTCAAGTGGGATCACCATGCTTGAAGAGGTTAACAAGAGCACTGAAAAAAGGGGTCTCAAACTTTTGCTTGCAAATCCAAGAAGCGAAGTGATCAAAAAGTTAAACGTGTCGAAGTTCATCGAGGCGATCGGACATGAACGGTTCTATCTCACAGTGGGAGAGGCTGTAACAGCCTGCAATCTCAAGCTCCACACTTGCAAGCCAAATCCTGTTGGTGCTGAATTAGATTCAACTGTGTAG 1941 47.35 MGNEEIESPHRVAIPPTKPFLVSLGANLKETFFPDDPFKQFKNQPIGAQILLWLKYFIPFLEWAPRYTFNFFKADLVAGITIASLAVPQGISYANLATIPPIIGLYSSFVPPLIYAMLGSSKDLAVGTVAVVSLLMSALLGKEVSPVEHPKEYVQLVFTATFFAGAFQASLGFLRLGVIVDFLSHAAIVGFMGGAATVVCLQQLKGIMGLVHFTHETDVVSVTRSLFSQIHQWRWQSVVLGCSFLSFLLLTRYLSKKKPIFFWINALAPLLSIILGSLLVYFTHAERHGVQVIGILKKGLNPLSVSDLVFGRPHLPIAIKTGIIIGIIGLAEGVAVGRSFATLKNYHIDGNKEMIAFGLMNIVGSCTSCYLTAGPFSRTAVNFNAGCKTAVSNIVMAMSLMITLLFLTPFFRYTPLAVLSSIIITAVIGLINYEEVIHLWKIDKFDFVVCIGAYIGVVFGSIETGLIVAITISLLRVLLVTARPRTSILGNIPNSTIYRSIDQYPTANRVPGALILQLEAPIYFANSNYVRERLSRWITDEEKRIKSSGLTSLQYIILDVSGVSSIDSSGITMLEEVNKSTEKRGLKLLLANPRSEVIKKLNVSKFIEAIGHERFYLTVGEAVTACNLKLHTCKPNPVGAELDSTV 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12815470 12820098 - Carg23494-RA Car14g01569 161471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01569 646 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
Car14g01569 646 Pfam Sulfate permease family 72 451 IPR011547 GO:0016021
Car14g01569 646 Gene3D STAS domain 483 629 IPR036513 -
Car14g01569 646 TIGRFAM sulP: sulfate permease 59 622 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car14g01569 646 Pfam STAS domain 504 622 IPR002645 -
Car14g01569 646 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Car14g01569 646 PANTHER BNAA04G05880D PROTEIN 4 640 IPR030311 GO:0008272|GO:0009507|GO:0015116
Car14g01569 646 PANTHER SULFATE TRANSPORTER 4 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car14g01569 646 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Car14g01569 646 SUPERFAMILY SpoIIaa-like 506 626 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00559 Car-Chr10:2824542 Car14g01569 Car-Chr14:12815470 0 dispersed
Car11g00469 Car-Chr11:2573890 Car14g01569 Car-Chr14:12815470 0 dispersed
Car14g01569 Car-Chr14:12815470 Car15g00671 Car-Chr15:3743521 0 dispersed
Car14g01569 Car-Chr14:12815470 Car17g01133 Car-Chr17:8699382 0 wgd
Car14g01569 Car-Chr14:12815470 Car06g01192 Car-Chr6:8732347 0 wgd
Car14g01569 Car-Chr14:12815470 Car08g00292 Car-Chr8:1877463 3.32E-35 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01569 K17471 - csv:101203205 1072.38