Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01580 ATGCCAGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTGCAGAACTCTGTTCAAAAACCTCAAAAAGCAACCCAAAATGGCAAAGGCCCGCCGAATCTGGAACATCAAAACATCAAATGTCGAAACCCATCTTCTCCTCCGAGCAAAAACAGAGGCAGGAGAAGAAGCCGAGGCGGCCGGAAATCCGATCAGGGGGAGGTTTACATGAGACCCAGTTCTCGGCCCTGCACAGTGGCGCGTAAACCAGATGAACCGGAATTTAACGCCGGAGATCTGGTGGCAAGAACTAATCCAAATGGTGGTAACATTTGTGGAATGGAAATGGGTTATCGAAATTCAAGCAAGTCCTTGAGTTTTGCCCCAAGGCCTGGATTCGGACAAGTTGGGACAAAATGTATTGTGAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTCACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGATTCTGAGCTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTATGGAAAGAGTTTAACATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTGGTTCTTAGGTTTGTTGCTCGTGCAAATTTACACCATTTGGGTCAGTTTCTGGCGGGTAAGCGTGCCGATGCTCCACAAGAAGCTCTTCAAATACTGGATATTGTATTGAGAGAGTTGTCATCCAAAAGGTACTGTCCTATAGGGAGATCCTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTAGGTGATGGGCTAGAATCATGGTGCGGGTTTTACCAAAGTATAAGACCCACTCAAATGGGGCTGTCTCTTAACATTGATATGGCTTCAGCTGCATTCATCGAGGCTCTCCCTGTCCTTGAATTCGTTGCTCAGCTACTAGGGAAAGATGTATTGTCCCGGCCATTGTCTGACGCTGATCGAGTAAAGATTAAAAAGGCTCTTAGGGGGGTGAAAGTTGAAGTAACACACCGGGGAAATGTAAGGCGGAAATATCGAGTTTCGGGTCTGACATCACAGCCTACACGAGAATTAGTATTTCCTGTTGATGACAACTCAACCATGAAGTCAGTTGTTGAATACTTCCAAGAGATGTATGGCTTCACCATTCAACACGCACATCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCGAATTACTTGCCAATGGAGGCCTGCAAAATTGTTGGGGGGCAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACTGCACTTCTAAAAGTCACGTGTCAAAGACCGAGGGATCGAGAAAATGACATTTTGCAGACTGTTCAACATAATGCTTATGATATGGATCCTTATGCCAAGGAGTTTGGGATTAAAATCAGTGAAAAGCTGGCTTCTGTTGAAGCTAGAATCCTCCCTCCTCCCTGGCTCAAATATCATGATACTGGAAAAGAGAAGGATTGCTTGCCTCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATTAACGGAATGACTGTTAATCGGTGGGCGTGCATCAACTTCTCTAGGAGTGTACAAGAAAGTGTTGCTCGTGGGTTTTGTACCGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCTGTTATTCCAATATACAATGCCAGGCCAGAACAGGTAGAGAAAGCTTTGAAGCATGTGTATCATGCTTCCATGAACAAGACTAAAGGGAAAGAGTTAGAGCTATTATTAGCTATTTTACCTGACAATAACGGGTCACTTTACGGTGACCTTAAGCGAATTTGTGAAACCGATCTTGGTTTAATATCACAATGCTGTCTTACGAAACACGTGTTCAAGATTAGTAAGCAGTACCTTGCTAATGTGTCACTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATCAGCTGCAGGATACCGCTTGTGAGTGACATACCAACAATAATATTTGGAGCCGACGTGACCCATCCAGAGAATGGCGAGGATTCCAGCCCTTCAATAGCTGCTGTAGTAGCCTCCCAGGATTGGCCTGAAGTGACTAAATATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGATTTGTACAAAACTTGGCAGGATCCTGTCCGTGGTACTGTCAGTGGTGGCATGATCAGGGATCTTCTGGTTTCCTTTAGGAAAGCAACAGGGCAGAAGCCTCTCAGAATAATATTTTACAGGGATGGCGTAAGTGAAGGACAATTCTACCAAGTATTACTTTATGAGTTGGATGCAATCAGGAAGGCATGTGCTTCTTTAGAACCGAATTACCAACCACCTGTAACGTTCATTGTCGTCCAAAAACGACACCACACACGATTGTTTGCCAACAACTATCGGGATAGAAGTAGCACAGACAAGAGTGGGAACATTTTACCTGGCACTGTAGTTGACTCCAAAATATGTCACCCAACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGAATTCAGGGGACAAGTCGGCCAGCACACTATCATGTTCTTTGGGATGAAAACAATTTTACTCCTGATGGAATTCAGTCATTAACGAACAATCTTTGCTACACGTATGCAAGGTGTACACGTTCGGTTTCTGTTGTTCCTCCAGCATACTATGCACATTTAGCTGCATTCCGAGCTCGATTCTACATGGAGCCAGAAATGCAGGAGAATGGCTCAGCTGGTCGTTCTGCCAAGAGCACACGCGCTACTGGAGAGTCTGGGGTTCGACCTTTGCCAGCTCTGAAGGAAAATGTGAAAAGAGTAATGTTTTACTGCTAG 2955 43.99 MPVRQMKESSEQHLVIKTHLQNSVQKPQKATQNGKGPPNLEHQNIKCRNPSSPPSKNRGRRRSRGGRKSDQGEVYMRPSSRPCTVARKPDEPEFNAGDLVARTNPNGGNICGMEMGYRNSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRDSELGKRLPAYDGRKSLYTAGELPFVWKEFNIKLVDEEDGVSGPKREREYKVVLRFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEALPVLEFVAQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDMDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCTELAQMCQVSGMEFNPEPVIPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTPDGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSAGRSAKSTRATGESGVRPLPALKENVKRVMFYC 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12873168 12880468 - Carg16607-RA Car14g01580 161482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01580 984 CDD PAZ_argonaute_like 333 447 - -
Car14g01580 984 Pfam N-terminal domain of argonaute 138 272 IPR032474 -
Car14g01580 984 MobiDBLite consensus disorder prediction 1 101 - -
Car14g01580 984 SMART Piwi_a_2 622 943 IPR003165 GO:0003676
Car14g01580 984 Pfam Argonaute linker 2 domain 474 520 IPR032472 -
Car14g01580 984 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 983 - -
Car14g01580 984 Pfam Argonaute linker 1 domain 282 331 IPR014811 -
Car14g01580 984 SUPERFAMILY PAZ domain 328 488 IPR036085 GO:0005515
Car14g01580 984 Gene3D - 691 984 IPR036397 GO:0003676
Car14g01580 984 MobiDBLite consensus disorder prediction 15 54 - -
Car14g01580 984 Pfam Mid domain of argonaute 531 608 IPR032473 -
Car14g01580 984 ProSiteProfiles PAZ domain profile. 334 448 IPR003100 GO:0005515
Car14g01580 984 Gene3D - 512 685 - -
Car14g01580 984 SMART DUF1785_2 281 333 IPR014811 -
Car14g01580 984 SUPERFAMILY Ribonuclease H-like 610 943 IPR012337 -
Car14g01580 984 Gene3D paz domain 327 452 - -
Car14g01580 984 SMART PAZ_2_a_3 338 470 IPR003100 GO:0005515
Car14g01580 984 Pfam PAZ domain 360 464 IPR003100 GO:0005515
Car14g01580 984 ProSiteProfiles Piwi domain profile. 622 943 IPR003165 GO:0003676
Car14g01580 984 CDD Piwi_ago-like 492 942 IPR045246 -
Car14g01580 984 PANTHER PROTEIN ARGONAUTE 10 57 983 - -
Car14g01580 984 Pfam Piwi domain 623 942 IPR003165 GO:0003676
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01179 Car14g01580 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00706 Car-Chr1:4199722 Car14g01580 Car-Chr14:12873168 0 dispersed
Car13g00206 Car-Chr13:2304489 Car14g01580 Car-Chr14:12873168 0 dispersed
Car13g00944 Car-Chr13:9613301 Car14g01580 Car-Chr14:12873168 0 dispersed
Car14g01580 Car-Chr14:12873168 Car18g01038 Car-Chr18:10704178 0 dispersed
Car11g00458 Car-Chr11:2527407 Car14g01580 Car-Chr14:12873168 0 transposed
Car14g01580 Car-Chr14:12873168 Car06g01179 Car-Chr6:8661963 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01580 K11593 - csv:101221352 1922.9