Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01592 ATGAAACCAGGGCTCCGGCCCACTCCGGCTGCAGTTCCGCGATCTGCCGGCACCACCCTTCTCGGGAAGTACGGCTTAGGCCGTCTTCTCGGCCGTGGAAGCTTCGCCAAAGTCTACCAAGCAGTTTCCTTAGCCGATAATTCCATCGTCGCCGTCAAAATTATCGACAAATCCAAAACCGTCGGCGCAACCCTTGAACGATGCATAGTCCGGGAGATCGCCGCCATGCGCCGACTCGATCACCACCCAAACATTCTGAAAATCCACGAAGTCATGGCCACCAAGTCCAAAATCTACCTGGTGGTGGAATTCGCCGCCGGAGGCGAACTCTTGGCGAAAATCTCCCGACGTGGACGTTTCACCGAAACCGTTGCTCGCCGATACTTTCAACAACTCGTCTCGGCCCTGAAATTCTGCCATGAAAATGGCGTTGTTCATCGCGATGTGAAACCGCAGAATCTTTTGCTGGACGAACAGGGCAATTTGAAAATCTCCGATTTTGGACTCTCTGCTTTACCCGAAAAACTCAAAGATGAATTGCTTCACACGGCTTGCGGAACTCCGGCATACTCGGCGCCGGAGGTCATGATCCGACGCGGAAACAGAGGATATGACGGAGGAAAGGCGGACGCCTGGTCTTGTGGAGTGATTTTATTCGTAATGCTTTCTGGGTTTCTCCCTTTCGAGGACAGGAACCTTGCGGCAATGTACAAGAAGATCCACCGGCGAGAATTTCAAATCCCTAAATGGATTTCGAAACCGGTCCGATTCTTAATTTATCACCTCCTCGATCCGAATCCCGAAACGAGGATGAGCATTGAGGCGCTAATGCAAAACCCTTGGTTCAAGAAATCGCTAGCACGGAAACAGAGTAACGAGAGCCTGATGCAGTCGATGAAGAATTATCGATTGGGGAAAGAGAGGGGAATAGGGGAAATGAACGCGTTCGATATAATTTCGATGTCATCGGGGTTGGATTTATCGGGGCTGTTTGAAACGACGGAGAAGAGGGCGGAGAGGAGGTTTACGTCGAGGGCGACGGTGGGGGAGGTGGAAGAGAGGGTGAGGGAGATCGGCGGGGTGTTGGGGTATGAGGTGGAGGCGGAGGCTGTGGCGAAGGGAGGGGCGATCGGAATGGGGAAGGGGAGGGTGGTGGTAGTGGTGGAAGTGGTGGAGATGGCGGTGGCGCCGGTGACATTGACGATGGTTGAGGTGAGGGTGATAAAAGGAGGGGAGGAATTTGAAGAGCTCCATTGGAGATGCTTTGAAGCTAAACTTGAAGGATTTGCTGTTCCATGGCAGATGAAATGTAATCTTTGA 1320 52.58 MKPGLRPTPAAVPRSAGTTLLGKYGLGRLLGRGSFAKVYQAVSLADNSIVAVKIIDKSKTVGATLERCIVREIAAMRRLDHHPNILKIHEVMATKSKIYLVVEFAAGGELLAKISRRGRFTETVARRYFQQLVSALKFCHENGVVHRDVKPQNLLLDEQGNLKISDFGLSALPEKLKDELLHTACGTPAYSAPEVMIRRGNRGYDGGKADAWSCGVILFVMLSGFLPFEDRNLAAMYKKIHRREFQIPKWISKPVRFLIYHLLDPNPETRMSIEALMQNPWFKKSLARKQSNESLMQSMKNYRLGKERGIGEMNAFDIISMSSGLDLSGLFETTEKRAERRFTSRATVGEVEERVREIGGVLGYEVEAEAVAKGGAIGMGKGRVVVVVEVVEMAVAPVTLTMVEVRVIKGGEEFEELHWRCFEAKLEGFAVPWQMKCNL 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12917140 12918459 + Carg16595-RA Car14g01592 161494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01592 439 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Car14g01592 439 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01592 439 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01592 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car14g01592 439 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Car14g01592 439 Pfam NAF domain 313 367 IPR004041 GO:0007165
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01592 Car17g00172 CCT
Car08g00998 Car14g01592 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01592 Car-Chr14:12917140 Car02g00512 Car-Chr2:4003411 1.17E-122 dispersed
Car14g01592 Car-Chr14:12917140 Car17g00172 Car-Chr17:1068128 0 wgd
Car14g01592 Car-Chr14:12917140 Car08g00998 Car-Chr8:6865320 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89352 PF00069 Pkinase 3.90E-70 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01592 K12761 - csv:101217555 701.819