Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01640 ATGTCGATGCATGCCATTAGTTTACTTCTTGAAGCTATTTTTCTGAAAGCAAAGTCATTACAGGGTTTAGGAAGGTTTGTAGAGGCGGCCAAATCATGCAAACTAATTCTGGACACTGTTGAATCTGCTTTACCAGAAGGCTTACCTGAAAACTTTGCTATTGATTGTAAATTGCAAGAGACACTAACGAAGGCTGTTGAATTACTTCCAGAATTGTGGAAATCTGCCGGGTCTCCAGAAGAATCAATCTTGTCATATAGGCGTGCCCTTCTCTATCAATGGAATCTGGAAATGGAGACCAGAGCAAAAATAGAAAAAGAGTTTGCAATATTCCTTCTCTATAGTGGTTGTGATGCAAGTCCTCCCAATCTCCGTTCACAGATGGAAAGCTCATTCGTGCCAAGAAGTAATATGGAAGAGGCCATTCTTCTTTTAATGGTTCTGATGAGAAAATATATACTTGGATTGATTGTATGGGACCCCTCAATAATAGAGCATCTCTCGTTTGCTCTGTCTATTTCAGGGGGATTTGGTGCTTTAGCTAATGAGGTTGAACAATTGCCTCCAGGAATTATAAGCAGAAAAGAAAAATACTGCAAATTAGCTCTTTGTTACTATGGGGAAGGTAAAAGCTTCATTGCGTTGAATCTTTTGAAGAACTTCTTGAGTAACATAGAGAATGTAGACTGTCTACTGGAATTGTTGCTGGCTTCAAAGCTCTGTGGGGAAAATTTGGTCTGTCTTGATGAGGGGGTGACATACACATTGAGAGTGCTTTCGAAGCTGCGTGGTAAATGCATTCAGATGGCTTCGGTGGCTAATTGTTTACTTGGCGTGCTGTTGTCGGTTATGTCCAAATTAGTCGCTTCCGATTCTCAGAAAGCTCTGAAACAGTCTGAAGCGCTCAAGGCGCTACAAACTGCTGAGCAGCTGATGAGACAAAGAGATCCATTCATTGTTTATCATCTTTGTCTTGAATATGCTGAACAAAGGACGCTGGATATGGCTCTATACTACGCAAAACAGTTAGTGAACCTCGAGGTTGGCTCTAGTCTGAAGTCTTACTTACTCTTGGCCAGAATATTGTCTGCCCAGCAACGATTTGTCGATGCAGAGACTGTACTCAATGCTGCTCTTGAGCAGACAGGGAAGTGGGAACAGGGGGAACTCTTACGAACTAAAGCTAAGCTCCAGATAGCACAGGGCCAGTTAAAGAATGGTATAGAAACATATACTCAACTTCTTGCTATAATTCAAGTCCAGACCAAAAGTAGTGGCGTTGGAAAGATGCTTTCAAAGGATGTGAGAAAATCTGAGAGAAGTCTGGAAATTGATACATGGCATGACTTGGCCAATATCTACACAAGCTTGTCTCAGTGGCGGGATGCTGAGATATGTCTGTCAAAATTGCAGAAAATCAATCCGTATTCTGCTTCCAAATGGCATTCCACAGGTTTACTGTATGAGTCGAAGGGTCTTCCACGAGATGCTTTGCAAGCATACAACAAAGCATTGGACATTGATCCTGGCCATGTTCCCAGCTTGATATCCACTGCCAGTCTTCTCCAACAGCTAGGTGGGAGGCAGTCATTTCCTGTTGCAAGAAGTTTGCTAACCGACGCCCTTCGACTTGATCGAGCAAACCCTTCTGCTTGGTACAGTCTCGGGCTGCTGTATAAAGCTGATGTTGGGGCGTCTGCGCTGGAGGTTGCTGAATGCTTTGAGGCTGCATCTCTGCTTGAAGAGTCAGCACCGGTTGAACCTTTCAGATGA 1773 43.26 MSMHAISLLLEAIFLKAKSLQGLGRFVEAAKSCKLILDTVESALPEGLPENFAIDCKLQETLTKAVELLPELWKSAGSPEESILSYRRALLYQWNLEMETRAKIEKEFAIFLLYSGCDASPPNLRSQMESSFVPRSNMEEAILLLMVLMRKYILGLIVWDPSIIEHLSFALSISGGFGALANEVEQLPPGIISRKEKYCKLALCYYGEGKSFIALNLLKNFLSNIENVDCLLELLLASKLCGENLVCLDEGVTYTLRVLSKLRGKCIQMASVANCLLGVLLSVMSKLVASDSQKALKQSEALKALQTAEQLMRQRDPFIVYHLCLEYAEQRTLDMALYYAKQLVNLEVGSSLKSYLLLARILSAQQRFVDAETVLNAALEQTGKWEQGELLRTKAKLQIAQGQLKNGIETYTQLLAIIQVQTKSSGVGKMLSKDVRKSERSLEIDTWHDLANIYTSLSQWRDAEICLSKLQKINPYSASKWHSTGLLYESKGLPRDALQAYNKALDIDPGHVPSLISTASLLQQLGGRQSFPVARSLLTDALRLDRANPSAWYSLGLLYKADVGASALEVAECFEAASLLEESAPVEPFR 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13139630 13142799 + Carg16547-RA Car14g01640 161542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01640 590 Pfam Tetratricopeptide repeat 485 510 IPR019734 GO:0005515
Car14g01640 590 ProSiteProfiles TPR repeat profile. 478 511 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01121 Car14g01640 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01640 Car-Chr14:13139630 Car19g00082 Car-Chr19:705867 0 wgd
Car14g01640 Car-Chr14:13139630 Car02g01484 Car-Chr2:9646193 0 wgd
Car14g01640 Car-Chr14:13139630 Car06g01121 Car-Chr6:8376873 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01640 K21843 - csv:101206105 1046.19