Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01649 ATGAACTGCTCCATTTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGACTACTCTTCGAGAAGCGTTTAATTGAGAGGCACATTTCTGACTATGGGAAATGCCCTGTTACTGGTGAACCGCTTTCCATCGATGACATGGTTCCAATTAAAACTGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGAATGGGATGTTTTAGTGCTGTCCAATTTTGCTCTAGAGCAACAGCTGCATACAGCTAGACAGGAGCTTAGTCACGCCTTGTATCAGCATGATGCAGCATGTCGTGTGATTGCAAGACTTAAAAAGGAACGCGATGAGGCTAGGTCATTACTTGCTCAGGCCGAGAGGCAGATGCCGTTGTCATCAACTCCAGTTTCATCTAATGCTGCTGTCAGTGGTAATGGGAAAAGAGTTAATGAGGATGAAGAATTGGGTCCTGATGGCAAGAAGATACGTCAAGGAATATCTGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAAGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACAGCCAGATTTCTAGCCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTTATTGCGACTGGAGGGCTGGACACAAATGCTGTTATTTTTGACAGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGCCCGAGATGATTTGTTCTTGACTGGTTCAGCCGACAAGACTGTTCGTGTGTGGCAACAATCTGACGATAGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCGGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCAGGATTATGCCTGACCCAGGTTACAGAGGCTTCAGAAACGGAGGGCTACACTTCTGCAGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACATCAGATGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAGATTTGATGGACACGTTGGGCCAGTAACTGCAATATCTTTTTCTGAAAATGGTTACTTCCTAGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGATCTTCGAAAATTGAAGAACTTTCGTACATTTTCACCTTATGATTCAGAAACTCCAACAGACTCTGTGGAATTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGATTTAAGGGTTTACCAAGTTGCCAGTGTGAAATCTGAATGGAATTGTATCAAAACTATTCCAGATTTGTCTGGCACAGGTAAAGCAACTTGTCTCAAATTTGGTCCAGATGCAAAATACTTGGCAGTTGGGTCCATGGATCGAAATCTTCGAATTTTCGGTGTGCCTGTGGTAGATGGCTCGATGGAAACATAA 1566 43.81 MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDMVPIKTGKIVKPRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTPVSSNAAVSGNGKRVNEDEELGPDGKKIRQGISATVISELTDCNAALSQQRKKRQIPPTLVPVEALESYSQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVIFDRSSGEILSTLSGHSKKVTSVKFVARDDLFLTGSADKTVRVWQQSDDRNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVTEASETEGYTSAAFHPDGLILGTGTSDALVKIWDVKSQKNVARFDGHVGPVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFSPYDSETPTDSVEFDHSGSYLAIAGSDLRVYQVASVKSEWNCIKTIPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPVVDGSMET 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13190148 13197339 + Carg16538-RA Car14g01649 161551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01649 521 Pfam Prp19/Pso4-like 64 129 IPR013915 -
Car14g01649 521 ProSiteProfiles Trp-Asp (WD) repeats profile. 348 389 IPR001680 GO:0005515
Car14g01649 521 MobiDBLite consensus disorder prediction 133 150 - -
Car14g01649 521 Pfam WD domain, G-beta repeat 473 510 IPR001680 GO:0005515
Car14g01649 521 Pfam WD domain, G-beta repeat 254 290 IPR001680 GO:0005515
Car14g01649 521 Pfam WD domain, G-beta repeat 385 421 IPR001680 GO:0005515
Car14g01649 521 ProSitePatterns Trp-Asp (WD) repeats signature. 367 381 IPR019775 -
Car14g01649 521 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 348 383 - -
Car14g01649 521 ProSiteProfiles Trp-Asp (WD) repeats profile. 390 430 IPR001680 GO:0005515
Car14g01649 521 MobiDBLite consensus disorder prediction 133 165 - -
Car14g01649 521 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 390 423 - -
Car14g01649 521 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 259 291 - -
Car14g01649 521 ProSiteProfiles U-box domain profile. 1 70 IPR003613 GO:0004842|GO:0016567
Car14g01649 521 Coils Coil 113 133 - -
Car14g01649 521 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 291 IPR001680 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01113 Car14g01649 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01649 Car-Chr14:13190148 Car03g00788 Car-Chr3:6546732 1.21E-14 dispersed
Car15g00450 Car-Chr15:2363648 Car14g01649 Car-Chr14:13190148 4.72E-08 transposed
Car14g01649 Car-Chr14:13190148 Car06g01113 Car-Chr6:8338280 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01649 K10599 - csv:101204424 971.074