Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01674 ATGGCAATGGCGGAATCTGGAGGGTGGATTCGTTTGTTTCTTCTCGTGGTGTTCATGTTGTTCGTCGGAGCAATTGCCAGAGTTCCCAAAGAGATTCCTGAAATTCATAATGAGGCAACCGGGAAGTTGCAGAGCTCAAGCAACTCATCAATGGCAGTGAGGTTGGAGGAGCCTGAGGCTGAGACTCCCGGCAATAAGCATGCCGTGGACAACCCAGACGAGATCGCTGCTATGGTTGACATGAGTATCCGCAATGCCACCGCGAGGAGAGAGCTTGGTTTCTTCTCGTGTGGAACCGGCAATCCTATTGATGACTGCTGGCGCTGCGACCCCAATTGGCAACAGAACCGCAAACGTCTAGCAGATTGTGGCATTGGCTTTGGCCGAAATGCCATCGGTGGTCGTGATGGTCGATTCTACGTCATCACTGACTCTGGCGACGATGACCCTGTCAACCCAAGGCCTGGCACTTTGCGACATGCCGTTATACAGGATGAACCTCTCTGGATCGTGTTCAAAAGAGACATGGTGATACAGCTGAAACAGGAGCTGATCATGAACAGTTTCAAGACAATTGATGCACGTGGGTCCAACGTGCATATTGCTAATGGAGCTTGCATCACAATCCAGTTTGTGACCAATGTTATTGTCCATGGTCTAAACATCCATGACTGCAAGCCCACTGGAAACGCCATGGTAAGGAGTTCACCCAATCACGTTGGGTGGAGAACAATTGCTGATGGGGATGCCATTTCCATTTTTGGGTCAAGTCATATTTGGATTGATCACAATTCCCTCTCTAACTGTGCTGATGGCCTCGTTGATGCTGTCATGGGATCCACCGCAATTACCATCACCAACAATTACTTCACCCACCACAATGAGGTGATGTTATTGGGGCATAGTGATTCTTACGTTAGAGATAAACAAATGCAAGTGACCATTGCTTACAATCACTTTGGAGAAGGACTCATCCAAAGAATGCCAAGGTGTAGACACGGATACTTCCATGTAGTGAACAATGATTATACTCACTGGGAAATGTACGCCATTGGTGGAAGTGCAAATCCAACCATCAACAGCCAGGGTAACAGATATGCTGCTCCAACCAACCCTTTTGCAAAAGAGGTGACCAAGAGAGTTGAGACAGCTGAATCTGAGTGGAAAAACTGGAATTGGAGATCAGAAGGAGACCTATTGATGAATGGTGCCTTTTTCACTCCATCTGGTGCAGGGGCCTCAGCAAGCTATGCTAGAGCCTCAAGCTTGGGAGCAAAATCTTCATCCATGGTTGCTACCATAACAGCCACCGCCGGTGCACTTTCCTGCCGGAGAGGCCATCCCTGCTAG 1350 48.59 MAMAESGGWIRLFLLVVFMLFVGAIARVPKEIPEIHNEATGKLQSSSNSSMAVRLEEPEAETPGNKHAVDNPDEIAAMVDMSIRNATARRELGFFSCGTGNPIDDCWRCDPNWQQNRKRLADCGIGFGRNAIGGRDGRFYVITDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQELIMNSFKTIDARGSNVHIANGACITIQFVTNVIVHGLNIHDCKPTGNAMVRSSPNHVGWRTIADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITITNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPTNPFAKEVTKRVETAESEWKNWNWRSEGDLLMNGAFFTPSGAGASASYARASSLGAKSSSMVATITATAGALSCRRGHPC 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13329725 13334248 - Carg16513-RA Car14g01674 161576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01674 449 MobiDBLite consensus disorder prediction 39 53 - -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 123 140 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 147 172 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 183 199 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 247 268 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 327 346 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 349 368 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 391 415 IPR018082 -
Car14g01674 449 PRINTS Pollen allergen Amb family signature 420 443 IPR018082 -
Car14g01674 449 Pfam Pectate lyase 186 364 IPR002022 -
Car14g01674 449 MobiDBLite consensus disorder prediction 39 70 - -
Car14g01674 449 Gene3D - 100 442 IPR012334 -
Car14g01674 449 PANTHER PECTATE LYASE 18-RELATED 14 446 IPR045032 GO:0030570
Car14g01674 449 SMART amb_all 175 372 IPR002022 -
Car14g01674 449 PANTHER PECTATE LYASE 14 446 - -
Car14g01674 449 SUPERFAMILY Pectin lyase-like 77 444 IPR011050 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01674 Car17g00103 CCT
Car08g00910 Car14g01674 CCT
Car08g00910 Car14g01674 ECH
Car14g01674 Car17g00103 ECH
Car06g01087 Car14g01674 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00617 Car-Chr13:7884129 Car14g01674 Car-Chr14:13329725 0 dispersed
Car14g01674 Car-Chr14:13329725 Car18g00198 Car-Chr18:1127035 0 dispersed
Car14g01674 Car-Chr14:13329725 Car17g00103 Car-Chr17:607458 0 wgd
Car14g01674 Car-Chr14:13329725 Car19g00112 Car-Chr19:937841 0 wgd
Car14g01674 Car-Chr14:13329725 Car02g01451 Car-Chr2:9460031 0 wgd
Car14g01674 Car-Chr14:13329725 Car06g01087 Car-Chr6:8171712 0 wgd
Car14g01674 Car-Chr14:13329725 Car08g00910 Car-Chr8:6115148 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01674 K01728 - csv:101218188 848.195