Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01693 ATGCCGCCAAGCTTCTCCAGCCACCACCACCACCACCAACACGATCTCTACAACAACCAAGACCAATTCATGAGGTCACGACCCTTCGAAACCTCCGCCGACAACGCCACCGGAATCCTCACCTACTTTCCGGCCAACCCTCTACCTCCTCCGCCGCTGCAATCCGTAACTTCACCGGACAAGCTCAGCTTTGCTGAGGTTATGCAGTTCGCCGACTTTGGTCCGAAGCTCAGCCTCAACCGGTTCGACGAGGATGACGAACCAGCCGGGATTGACCCAGTCTACTTCTTGAAGTTCCCGGTTCTGAATAACGAGAGGGCGGAGGAGGCGGCGGCCGGAGAGGAGGAAGCGGCGGAGATGGGAGGCAGAATTGTAGGGGAGTTAGAAGAAGAGGAGAATTTTAGGAACAATAAAAATGGTAATAATAATAATAATAATAATAATGGTAATAGTAATAAAAGGAAAAGAGGAAGGACGGTGAAGACAAGCGAAGAGGTGGAGAGCCAAAGAATGACGCATATTGCGGTGGAGAGAAATCGAAGGAAGCAGATGAATGAACATCTCCGCGTTTTGCGCTCTCTCATGCCTGGTTCGTACGTTCAAAGGGGAGATCAAGCCTCCATAATCGGCGGAGCGATCGAGTTCGTGAGGGAGCTGGAGCAGCTTCTCCAGTGTCTAGAATCGCAAAAACGACGTCGTCTTCTAGGAGAGCCACCACTGCAGGCAGGCGACACACCTCCGCCGCAGCAACCGCCATTTCTGCCGCCGGGAGCAGGGAATTTCGGTGGTCATCAAAACGAGGGGCAAATATTGGAAACCACGGCGGAGAGCAAATCGTGCTTAGCTGACGTGGAAGTGAAGGTTTTAGGGTTCGACGCAATGATAAAGATCCTGTCGAGAAGACGACCGGGACAGCTGATTAAAGCCATCGCCGCCCTCGAAGATCTTCAGCTCAATATTCTTCATACAAATATTACCACCATTGAACAGACTGTTCTTTATTCCTTCAACGTCAAGATAGCAAGCGAGTCAAGATTCACAGCAGAGGATATAGCGAGCTCGGTTCAGCAGATATTCGGTTTTATTCATGCGAACACCGGCATGTGA 1107 50.95 MPPSFSSHHHHHQHDLYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEAAAGEEEAAEMGGRIVGELEEEENFRNNKNGNNNNNNNNGNSNKRKRGRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQAGDTPPPQQPPFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13466480 13468382 + Carg24760-RA Car14g01693 161595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01693 368 MobiDBLite consensus disorder prediction 157 171 - -
Car14g01693 368 Pfam Helix-loop-helix DNA-binding domain 169 220 IPR011598 GO:0046983
Car14g01693 368 MobiDBLite consensus disorder prediction 134 171 - -
Car14g01693 368 MobiDBLite consensus disorder prediction 237 266 - -
Car14g01693 368 ProSiteProfiles ACT domain profile. 294 368 IPR002912 -
Car14g01693 368 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 219 IPR011598 GO:0046983
Car14g01693 368 MobiDBLite consensus disorder prediction 137 153 - -
Car14g01693 368 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01234 Car-Chr6:8927838 Car14g01693 Car-Chr14:13466480 2.36E-51 dispersed
Car12g00613 Car-Chr12:4150865 Car14g01693 Car-Chr14:13466480 2.11E-59 dispersed
Car14g01693 Car-Chr14:13466480 Car04g00791 Car-Chr4:4568583 2.26E-44 dispersed
Car17g00067 Car-Chr17:383812 Car14g01693 Car-Chr14:13466480 8.29E-13 dispersed
Car18g01215 Car-Chr18:11718364 Car14g01693 Car-Chr14:13466480 2.43E-13 dispersed
Car14g01693 Car-Chr14:13466480 Car12g00206 Car-Chr12:1299052 5.36E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4743 PF00010 HLH 7.50E-10 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01693 - - cpep:111790068 598.971