Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g01784 | ATGGAGGAGAGAGAAGCCATAAATACAGGAGTAACAGTGATAGGAGCCGAAGCTCCGTCGGCTTACCACGTAGCTCCGAGAACCGAGAACCCGCCGCCGGCTAGCGGCGGCGGTGGCGGTTCGCCAACCGTCGCCGCGTCGCCGGTCAGTGTGGGGCTACCCGGAAGTGAAACCACAGGGAAAAAGAAGCGGGGGAGACCTAGAAAGTACGGTCCAGATGGAACGGTAACCATGGCATTGTCACCATTGCCGCTTTCTTCCTCAGCTCCGGGGGCCGGCGGCTTCTCCATCACGAAGCGGGGGAAGGGCCGGCTCGGCGGCTCTGAATTCAAGCACCACAAGAAAATGGGAATGGAATATATAGGAGAATGGAATGCGTGTTCTGTCGGTACTAATTTCATGCCTCATATCATCACGGTCAATGCTGGCGAGGATGTCACTATGAAGATCATATCATTTTCCCAACAAGGTCCTCGAGCGATCTGTATTCTTTCTGCGAATGGTGTAATTTCCAATGTCACTCTCCGGCAGCCCGATTCTTCGGGTGGTACTTTAACATATGAGGGTCGTTTCGAGATACTTTCATTGTCTGGATCGTTCATGCCTACTGAAAATCAAGGATCGAGAAGCAGGTCAGGTGGGATGAGTGTCTCCTTGGCGAGCCCGGACGGTCGTGTTGTTGGGGGAGGGGTAGCTGGTTTGCTTATAGCTGCAGGCCCTGTACAGGTTGTGGTAGGGAGTTTTCTACCAACTAGTAGCCAACAGGAGCCGAAAGTAAAGAAACAGAAGCCTGAATCAGTACCAGCTGCAGCCCCTGTTGCAGCCCCGACCACAACACCAGCCACCACCGTGCCGACTTCCAATGCCGATACAGACGACAGTTTAAACGGTAACGGTCAACCAAATCCCGGGTCCCTAAAACCGGCCAGTTTTGCTCCTTCGGCTTTCCAGAGAGACAATTGGGGTGCCAATGCTGCCGTGCGTTCTTCCTTGCAGGAGCCGAGAAATTCGCCCACCGACATCAATATATCGCTCCCGGGCTAA | 1044 | 54.02 | MEEREAINTGVTVIGAEAPSAYHVAPRTENPPPASGGGGGSPTVAASPVSVGLPGSETTGKKKRGRPRKYGPDGTVTMALSPLPLSSSAPGAGGFSITKRGKGRLGGSEFKHHKKMGMEYIGEWNACSVGTNFMPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGSRSRSGGMSVSLASPDGRVVGGGVAGLLIAAGPVQVVVGSFLPTSSQQEPKVKKQKPESVPAAAPVAAPTTTPATTVPTSNADTDDSLNGNGQPNPGSLKPASFAPSAFQRDNWGANAAVRSSLQEPRNSPTDINISLPG | 347 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 13966301 | 13971024 | - | Carg14834-RA | Car14g01784 | 161686 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g01784 | 347 | CDD | DUF296 | 135 | 248 | IPR005175 | - | |
| Car14g01784 | 347 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 135 | 248 | IPR005175 | - | |
| Car14g01784 | 347 | ProSiteProfiles | PPC domain profile profile. | 130 | 269 | IPR005175 | - | |
| Car14g01784 | 347 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 1 | 346 | - | - | |
| Car14g01784 | 347 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 133 | 257 | - | - | |
| Car14g01784 | 347 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 346 | IPR039605 | GO:0003680 | |
| Car14g01784 | 347 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
| Car14g01784 | 347 | Gene3D | - | 135 | 265 | - | - | |
| Car14g01784 | 347 | MobiDBLite | consensus disorder prediction | 252 | 347 | - | - | |
| Car14g01784 | 347 | MobiDBLite | consensus disorder prediction | 276 | 307 | - | - | |
| Car14g01784 | 347 | MobiDBLite | consensus disorder prediction | 323 | 347 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g01272 | Car-Chr2:8526097 | Car14g01784 | Car-Chr14:13966301 | 1.59E-93 | dispersed | |
| Car14g01784 | Car-Chr14:13966301 | Car16g00986 | Car-Chr16:8368895 | 1.18E-87 | dispersed | |
| Car14g01784 | Car-Chr14:13966301 | Car15g01061 | Car-Chr15:8352036 | 3.51E-102 | wgd | |
| Car14g01784 | Car-Chr14:13966301 | Car02g00752 | Car-Chr2:5508278 | 5.09E-90 | wgd | |
| Car14g01784 | Car-Chr14:13966301 | Car06g00971 | Car-Chr6:7448183 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g01784 | - | - | csv:101212918 | 541.576 |