Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01786 ATGCTCGATTTGCTCGATTTGCCTATGCTTCATGACGGGCCTGTTTTAGATGCAGGATGTATAAACTGCTATCTGTACAAATCTCTGACTGCTCCGAGTGCATATGATAAATCTGTCTCTGGTTTTTTGGCTGAATCAGTTCATACTGCACAGCCTTTTAGCAGAACAGCTATCGAGCCTCGAGTATGCAGGTCAAGCGGCCTGCTGATGGTGCCTTTTAATGGAACCCCAGTTGCATCAGCTGGCTTTAAGCTTTTGATGAAAGAAAGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCCGCAGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTTCTGCATATTCCTGAACACAAGCGCCTCGACGCAGCTATAACTATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACAGCACCGCATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAAATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAA 987 48.43 MLDLLDLPMLHDGPVLDAGCINCYLYKSLTAPSAYDKSVSGFLAESVHTAQPFSRTAIEPRVCRSSGLLMVPFNGTPVASAGFKLLMKERQESKAEMSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQASPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13982357 13986765 + Carg14831-RA Car14g01786 161688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01786 328 Pfam Lateral organ boundaries (LOB) domain 121 219 IPR004883 -
Car14g01786 328 MobiDBLite consensus disorder prediction 94 120 - -
Car14g01786 328 ProSiteProfiles LOB domain profile. 120 222 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00835 Car-Chr8:5589206 Car14g01786 Car-Chr14:13982357 4.45E-65 dispersed
Car14g01786 Car-Chr14:13982357 Car17g00029 Car-Chr17:129349 1.36E-52 dispersed
Car14g01786 Car-Chr14:13982357 Car17g00028 Car-Chr17:122751 3.80E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4748 PF03195 LOB 1.70E-36 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01786 K21994 - csv:101216934 354.369