Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01800 TTTTTGCTCTCCCAACCACATTCCCTTAGGGCTTCTTCTTGTTCGTGTTATTGTTCTTGTTCTCGTTCTCGTTCTCGTTCTTTCTTATACGGATTTCGAAGAAAATTAAATATATATGCAGAAATGGTGAGAGGGAAAACTGAGATGAGGCGAATCGAGAATGCGACGAGTCGTCAAGTTACGTTCTCGAAGCGTCGGAACGGGTTGCTGAAGAAGGCGTTCGAGCTCTCCGTTCTTTGTGACGCTGAACTTGCTCTTATCATCTTCTCTTCTACTGGAAAGCTTTATGAATTTGCTAGCTCCAGCTTGCAGGCCACAGTGGGGCGTTATCTAAGGCATACCAAAGCATCTCATCGTCTTCAACCTCCATCTCATCAACACGACTTACAATCGGTTCAGAATGAAGCTACGAGTTTGTTGGACGAGATCGAGTCACTCGAGGTTTCGAAGAGGAAATTGTTGGGAGAAGGTCTAGGATCAAGCTCCTATGAAGAACTTGAACAAATAGAAAAGCAGCTAGAGAGCAGCTTGGCTCATGTTAAAGCTAGAAAGTACGAGGTTTACAAGGAACAGATTGAACAACTAAAAGAAAAGGAGAAATATTTGGCGGCTGAAAATGCAAAGCTTGCTAAAAAGTCTACAGTTCTCTCCGTTCTTGTGTTCATCGACGATGGCGCTGAAGAAAGGATCGGTGTCTGGTTTTGCTAA 708 43.64 FLLSQPHSLRASSCSCYCSCSRSRSRSFLYGFRRKLNIYAEMVRGKTEMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSTGKLYEFASSSLQATVGRYLRHTKASHRLQPPSHQHDLQSVQNEATSLLDEIESLEVSKRKLLGEGLGSSSYEELEQIEKQLESSLAHVKARKYEVYKEQIEQLKEKEKYLAAENAKLAKKSTVLSVLVFIDDGAEERIGVWFC 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14086186 14090324 - Carg14815-RA Car14g01800 161702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01800 235 ProSiteProfiles MADS-box domain profile. 42 102 IPR002100 GO:0003677|GO:0046983
Car14g01800 235 Pfam K-box region 124 212 IPR002487 GO:0003700|GO:0005634|GO:0006355
Car14g01800 235 Coils Coil 163 212 - -
Car14g01800 235 ProSitePatterns MADS-box domain signature. 44 98 IPR002100 GO:0003677|GO:0046983
Car14g01800 235 ProSiteProfiles K-box domain profile. 129 219 IPR002487 GO:0003700|GO:0005634|GO:0006355
Car14g01800 235 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 51 98 IPR002100 GO:0003677|GO:0046983
Car14g01800 235 Coils Coil 129 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00044 Car-Chr3:525038 Car14g01800 Car-Chr14:14086186 1.72E-37 dispersed
Car14g01800 Car-Chr14:14086186 Car15g01258 Car-Chr15:9821035 9.76E-55 dispersed
Car09g01147 Car-Chr9:11972960 Car14g01800 Car-Chr14:14086186 1.19E-40 transposed
Car14g01800 Car-Chr14:14086186 Car15g01075 Car-Chr15:8437266 1.83E-54 wgd
Car14g01800 Car-Chr14:14086186 Car02g00770 Car-Chr2:5617406 7.52E-14 wgd
Car14g01800 Car-Chr14:14086186 Car06g00953 Car-Chr6:7342139 1.50E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4750 PF01486 K-box 1.20E-25 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01800 - - csv:101209501 253.062