Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01815 ATGAGCTCCGCACCACGATTCGACTCTAGTAGTGCTCACGGCGGCGGCGGCATCGGCGGTGGACACGGCACTCTTATGGCCTCCGGTGCAATTGCTCACCCACGTCTTGTTACTCAGTCTTCTTTCTCCAAATCCATGTTCTCTTCCCCTAGACTCTCTCTCGCTCTTACTAATATCGATGGTTTCGGCGCCGGGGAGATGATTTCGGCGGATGCTGGTTTTGAGGAGAATGTGAGGAGGAGGAGAAGAGAGGAAGAGGCCACGGACAGCAGATCTGGTAGTGATAACATGGACGGCGGCGGTGGTTCTGGCGACGATCTGGACGCCGCTGTCGGCGATAATCCTAGGAAGAAGAAACGGTACCACCGTCACACTCCGCAACAAATCCAAGAACTCGAAGCTATGTTCAAGGAGTGTCCTCATCCTGATGAGAAACAAAGATTGGAGCTCAGTAGAAGACTGTCTTTAGAAATAAAACAAGTTAAATTCTGGTTTCAAAATCGTCGAACTCAAATGAAGACGCAACTGGAACGCCATGAAAACACATTACTAAGACACGAGAACGAGAAGCTCCGAACAGAGAACATGGCGATTCGAGAGGCGATGAGAAGCCCAATCTGCTCAAACTGCGGCGGACCGGCTATCATCGGAGAAATCTCCTTAGAAGAACAGCAACTCCGAATCGAAAACGCTCGATTGAAGGACGAATTGGACCGGGTGTGCGCTCTAGCCGGAAAATTCGTGGGGAGGCCGGTTCCAGTATCACCGCCATTGGAGGAATATGGAGGTGGAATGATGATGATGGAGAGATGCGTGTATTTGGAAATGGCCTTGGCGGCCATGGATGAGCTTGTGAAAATGGCGAACGGGGAAGAACCACTGTGGATTGGAGAAAAACTGAACGAAGAAGAATATTCGAGAATGTTCAGCGGCGGTTGTTTTGGTGGCTTCGTTTCTGAAGCTTCCAGAGAATCTGCTCTCCTCTTCCTCCACTCTTCTTCTCTCCTCGACACTCTAATGGAGGCTAACCGGTGGGTGGAGATGTTTCCGAACTTGATTGCGACGGCGACCACCACCGACGTAATCTCCGGCGGAATGGGAGGAACCCGAAACGGCGCTCTTCAATTGATGCATGCGGAGCTTCAAATTCTGTCTCCCATGGTTCCGGTGAGACAATTAAATTTCCTCCGCTTCTGCAAGCAGCATGCCGAAGGCGTTTGGGCGGTTGTTGACGTCTCCATCGATCCCATTACCGATACTTCCTCTCCGCCGTGCCGGAGACTCCCCTCCGGCTGCCTCATCCACGACATGCCCAATGGCTACTCCAAGGTTACTTGGGTTGAGCATTCTGAATACGATGAAAGCCAAATTCATGAGCTGTACCGACCCCTTGTCCGCTCCGGCCTTGGCTTTGGCGCGCGACGGTGGATCGCCACCCTCCAGCGCCAATCTGAAGCCCTCGCCACCCTCCTCTCCTCCCCATCTGACCATTCCGGGATATCCGCCGACGGACGGCGGAACATGGTGAAGCTAGCGCAGCGGATGACAGCAAATTTCTGCACAGGAGTATGCGCATCAACGGTGTACAAATGGAACAAGCTGAACACGGGCAATAACAATGTTGGAGAGGATGTGAGAGTGATGACAAGGAAGAGCGTGGAGGATCCAGGGGAGCCGCCAGGGACGGTGCTGAGTGCAGCAACGTCGGTGTGGGTGGCGGCGACAGCAGAGAGAGTGTTTGAGTTTCTTCGTGATGAGCGACTGAGGAGCGAATGGGACATTCTGTCCAACGGCGGCCCCATGCAGGAAATGCTCCATATCCCCAAAGCCCATCACCATCACCATGCCAACGCTGTCTCTCTCCTCCGTTCCACCCAGTCTCTAAATCCAAACCAGAGCAGTATGCTGATTCTCCAAGAGACCTGCTCCGATGCATCTGGGTCGCTTGTAGTGTACGCGCCGGTGGATATTCCGGCAATGCAGGTGGTGATGAACGGCGGAGACTCGGCCTACGTGGCTCTACTACCGTCGGGGTTCGCGGTGGTACCGGCGGCGGAGGATTGTGGCGGTGGGAGCCTGTTGACGGTGGCGTTTCAGATATTGGTGAACAGTTTACCCACGGATAAGCTGACGGTGGAGTCGGTGGAGACGGTGAATAATCTGATATCGTGTACGGTACAGAAAATTAAAACCGCTCTCCGGTGTCACGAGCTTTCCACGTGA 2223 53.71 MSSAPRFDSSSAHGGGGIGGGHGTLMASGAIAHPRLVTQSSFSKSMFSSPRLSLALTNIDGFGAGEMISADAGFEENVRRRRREEEATDSRSGSDNMDGGGGSGDDLDAAVGDNPRKKKRYHRHTPQQIQELEAMFKECPHPDEKQRLELSRRLSLEIKQVKFWFQNRRTQMKTQLERHENTLLRHENEKLRTENMAIREAMRSPICSNCGGPAIIGEISLEEQQLRIENARLKDELDRVCALAGKFVGRPVPVSPPLEEYGGGMMMMERCVYLEMALAAMDELVKMANGEEPLWIGEKLNEEEYSRMFSGGCFGGFVSEASRESALLFLHSSSLLDTLMEANRWVEMFPNLIATATTTDVISGGMGGTRNGALQLMHAELQILSPMVPVRQLNFLRFCKQHAEGVWAVVDVSIDPITDTSSPPCRRLPSGCLIHDMPNGYSKVTWVEHSEYDESQIHELYRPLVRSGLGFGARRWIATLQRQSEALATLLSSPSDHSGISADGRRNMVKLAQRMTANFCTGVCASTVYKWNKLNTGNNNVGEDVRVMTRKSVEDPGEPPGTVLSAATSVWVAATAERVFEFLRDERLRSEWDILSNGGPMQEMLHIPKAHHHHHANAVSLLRSTQSLNPNQSSMLILQETCSDASGSLVVYAPVDIPAMQVVMNGGDSAYVALLPSGFAVVPAAEDCGGGSLLTVAFQILVNSLPTDKLTVESVETVNNLISCTVQKIKTALRCHELST 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14156770 14160537 + Carg14800-RA Car14g01815 161717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01815 740 Coils Coil 169 196 - -
Car14g01815 740 ProSitePatterns 'Homeobox' domain signature. 150 173 IPR017970 GO:0000981|GO:0006355
Car14g01815 740 MobiDBLite consensus disorder prediction 75 125 - -
Car14g01815 740 Coils Coil 216 236 - -
Car14g01815 740 MobiDBLite consensus disorder prediction 1 21 - -
Car14g01815 740 ProSiteProfiles START domain profile. 266 489 IPR002913 GO:0008289
Car14g01815 740 Pfam Homeodomain 118 173 IPR001356 GO:0003677
Car14g01815 740 ProSiteProfiles 'Homeobox' domain profile. 115 175 IPR001356 GO:0003677
Car14g01815 740 MobiDBLite consensus disorder prediction 75 92 - -
Car14g01815 740 Pfam START domain 276 485 IPR002913 GO:0008289
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01815 Car17g00018 CCT
Car14g01815 Car17g00018 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01815 Car-Chr14:14156770 Car17g00018 Car-Chr17:71992 0 dispersed
Car14g01815 Car-Chr14:14156770 Car18g01138 Car-Chr18:11310355 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4752 PF01852 START 1.00E-47 CL0209 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01815 K09338 - csv:101222248 939.102