Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g01816 | ATGCGTAATTCGATCCCACAGCCTTCTTCTCCCATCCGTGCGGTGGATAATTCGCCTCTGCTCGCGCACTCCGTCGCCGATGGCCTTTTCCGTTCGCGAGGGTTTATTCGCCGTTCGCCTCAACCTCTTCGCGGAGCGGTTCGTCTTCTCCGCCGTGCAAGTGGCCGGCAGATGATGCTTCGAGAATCCTCCGTTCGTGTCCGCGAGAACGCCGCGGAGCAGCTGGAGGAGCGCCAGAGCGATTGGGCGTACTCAAAGCCGATTATCCTTTTGGACCTTCTATGGAACTTGGCCTTCGTCGCCATTAGTTTCACTGTCATAGGGCTCAGCACGAGTGAAAAACCTTCAGTGCCGCTCAGGTTTTGGATCATTGGATATGCTTTGCAGTGTATAATTCACATGTCCTGTGTAGCTACAGAGTATAAGCGGCGGCGCTCAACGAGAGAGCTCGTCGGATCGGACCGTAGCGGTGGCTGGACGAGCAGCGAGGATTCAAATTCGATATCTGGAAGCGATGGCGATGATTATGCGACCGAGCTCACTGTGAATGACGATGAACCGAGCAATCTTGTGAAGCATATTGAGTCTGCAAATACCATGTTCTCTTTCATTTGGTGGCTGTTGGGCTTTTATTGGGTGACTGCTGGAGGCCAAGAATTGATAGATGATTCACCTCAGCTATACTGGCTTTGTATTACATTCCTTGCTTTCGATGTCGTATTTGTTCTGATTTGTGTTGCCATTGCGTGTCTTGTTGGTGTTGCAATTTGCTGCTGTCTGCCTTGCATAATTGCCATCTTGTATGCGGTTACCGATCAGGAAGGAGCTACTAAGGAAGAGATCGAACGCTTACCGAAGTACAAATTTAACAGAACGGGTGATGTCGAGAAAGTGAATGGTGATATTCAAGAATCTACCGGAGGAATGATGACTAAATGTGACACTGATGCACCGACAGAGCGTTTTCTTCGCTCGGAGGATTCTGAGTGTTGCATCTGCCTCTCTGCTTACGAAAACGGAACCGAGCTACGAGAACTTCCCTGTAACCACCATTTTCACTGCAACTGCATCGACAAATGGTTGCACATGAATGCTACCTGCCCTCTCTGCAAGTTCAACATCTTGACGCCCAACGGTTCCGGTAGCGAAGAAGTGTGA | 1158 | 50.09 | MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATELTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLVGVAICCCLPCIIAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNGDIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILTPNGSGSEEV | 385 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 14162160 | 14165206 | + | Carg14799-RA | Car14g01816 | 161718 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g01816 | 385 | MobiDBLite | consensus disorder prediction | 153 | 172 | - | - | |
| Car14g01816 | 385 | Pfam | Ring finger domain | 329 | 371 | IPR001841 | - | |
| Car14g01816 | 385 | ProSiteProfiles | Zinc finger RING-type profile. | 330 | 371 | IPR001841 | - | |
| Car14g01816 | 385 | MobiDBLite | consensus disorder prediction | 151 | 172 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car14g01816 | Car17g00511 | CCT | |
| Car06g00939 | Car14g01816 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car06g00026 | Car-Chr6:233183 | Car14g01816 | Car-Chr14:14162160 | 1.53E-87 | dispersed | |
| Car06g00644 | Car-Chr6:3862694 | Car14g01816 | Car-Chr14:14162160 | 2.39E-155 | dispersed | |
| Car12g00287 | Car-Chr12:1879624 | Car14g01816 | Car-Chr14:14162160 | 4.09E-51 | dispersed | |
| Car14g00446 | Car-Chr14:2341757 | Car14g01816 | Car-Chr14:14162160 | 3.97E-89 | dispersed | |
| Car14g01816 | Car-Chr14:14162160 | Car16g00969 | Car-Chr16:8084760 | 2.37E-142 | dispersed | |
| Car04g02046 | Car-Chr4:16651586 | Car14g01816 | Car-Chr14:14162160 | 2.19E-86 | transposed | |
| Car14g01816 | Car-Chr14:14162160 | Car06g00939 | Car-Chr6:7258309 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g01816 | - | - | csv:101205399 | 707.983 |