Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01831 ATGGCGGGCTTAGATTTGGGCTCTGCTTCTAACTTTGTCCATCAACTTCAGCACCGTTCCGTGGATCTCCACTTGCAGCGGCCGCCGGACGGAGACGACGGTTCCGACCAGTTCCACGGACTTGATGACGAGCAGCAACCGAACTCTGGTGGCGAAATCGTGGCCCGGCGGTCGAGAGGTCGACCGCCTGGGTCTAAAAATAAACCGAAGCCACCGGTTATTATTACCAGAGAAAGCGCTAACACCCTTCGTGCACACATCTTGGAAGTCAACACCGGTTGCGATGTGTTTGATTCGGTGGCTACTTATGCCCGGAAACGCCAACGGGGGATCTGCATCTTGAGCGGCACCGGCGTCGTCACCAACGTTACTTTACGGCAACCCGCGTCCGGCGGCGCCGTTCTCACGCTTCCCGGAAGGTTTGAGATATTGTCTTTGTCGGGATCGTTTTTGCCGCCGCCGGCTCCGCCAGGAGCGACGAGTTTGAGTATCTTCCTTGGCGGTGGACAAGGGCAGATTGTGGGAGGGAATGTTGCTGGCTCTTTGATTGCTTCTGGACCGGTGACTGTTATTGTGTCGTCGTTTACGAATGTTGCGTACGAGAGGCTGCCGTTGGATGAGGAGGAACCGTCCAACGGTGGTGGTGGCGGTGGTGGAGGGAGCCTTAGCAACCCGTTTCCGGACCCGTCGGTGGGGTTGCCGTTCCTTAATCTGCCATTGAACATGCCGGGGAATCAAAATCAGCTGCCGGTGGAGGGATGGAACTCCGGTGGGGGAGCATCTTATTGA 789 57.03 MAGLDLGSASNFVHQLQHRSVDLHLQRPPDGDDGSDQFHGLDDEQQPNSGGEIVARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICILSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQIVGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSNGGGGGGGGSLSNPFPDPSVGLPFLNLPLNMPGNQNQLPVEGWNSGGGASY 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14239553 14240458 - Carg28226-RA Car14g01831 161733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01831 262 MobiDBLite consensus disorder prediction 24 40 - -
Car14g01831 262 CDD DUF296 84 195 IPR005175 -
Car14g01831 262 MobiDBLite consensus disorder prediction 205 226 - -
Car14g01831 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 257 IPR014476 GO:0003680
Car14g01831 262 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 208 - -
Car14g01831 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 257 - -
Car14g01831 262 MobiDBLite consensus disorder prediction 24 73 - -
Car14g01831 262 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Car14g01831 262 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Car14g01831 262 Gene3D - 83 211 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01042 Car14g01831 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01367 Car-Chr2:9050395 Car14g01831 Car-Chr14:14239553 7.37E-95 dispersed
Car06g00585 Car-Chr6:3358808 Car14g01831 Car-Chr14:14239553 9.23E-86 dispersed
Car08g00860 Car-Chr8:5747239 Car14g01831 Car-Chr14:14239553 2.76E-107 dispersed
Car14g01831 Car-Chr14:14239553 Car16g01091 Car-Chr16:9371877 7.96E-79 dispersed
Car17g00027 Car-Chr17:118146 Car14g01831 Car-Chr14:14239553 2.19E-69 dispersed
Car14g01831 Car-Chr14:14239553 Car17g00053 Car-Chr17:269123 4.80E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01831 - - csv:101220959 419.468