Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01856 ATGGCATCAAGTTTGGGAGGGGCGTCGGTGTCGCAAACAGATGATTTTGAGACGTTCACTCCAACGACAGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAAAAAGCTGCTCCTGAGATTCTACCCTTTGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAATTAATGGAAGATACTATAGAGGAGTATTCAAGAAGTGGCATCGATCCCCTAATTGTATCACTCTATCAGATGGATTTAGATAGGACACAGTTCTTGTTAAGATCATATATTAGGATTCGCTTACAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTGAGGAAGAGATAACATTTACTGATAGGTGTAGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAATAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACGTTTGTGGTCTGCAAAAGTAAGGAGTATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCTAGTAGAGTAGAGGAACCGTTTGAGATGGAGGCCAATGTATTACACATTATTCGCTACAAGCCTATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAG 690 40.14 MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSEEEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14389398 14392208 + Carg20989-RA Car14g01856 161758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01856 229 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 229 IPR031633 -
Car14g01856 229 SUPERFAMILY PriA/YqbF domain 170 229 - -
Car14g01856 229 Coils Coil 49 69 - -
Car14g01856 229 MobiDBLite consensus disorder prediction 1 20 - -
Car14g01856 229 PANTHER SLD5 PROTEIN 10 229 IPR008591 GO:0006261
Car14g01856 229 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Car14g01856 229 MobiDBLite consensus disorder prediction 1 21 - -
Car14g01856 229 Gene3D - 11 219 - -
Car14g01856 229 PIRSF GINS_Sld5 1 229 IPR008591 GO:0006261
Car14g01856 229 Pfam GINS complex protein 75 123 IPR021151 -
Car14g01856 229 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01856 Car-Chr14:14389398 Car06g00912 Car-Chr6:7052102 3.47E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01856 K10735 - csv:101210888 426.017