Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01866 ATGGAAGTCGATTGGGATCTTCACGCCGTCGTCAGAGGCTACTCCGCCGTGTCCTCCGCCGCCACCATTCCCTCTTCTGACTTTTACTCTGTTTCTTCCACTTCTAATAACTCTACCCCTTTTGCTTTTGGTAGAGACCTAACCAACCAAACAAACCATTTCTTCTCCCTTCAAGATCCATTCGAAGGGCCTAATTGTAATTCCACTGAAGAATTGCATGAGCTTTTCAAACCCTTTTCCCCTAAACCTCTACCTTCTCCGCCGCCACCGCCACCGTCTGCTCCGCTGCTGCTTTCTTCTCCGGCGGCTAAGATTTTGACCCATCAGAAGCAACGGCAGAACACCCATGTCCCCAAACAGCTCCATTCAGCCCCTGTTTCTGCGTCAAGATCTAAACGCCGGAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCGGCGGAATCTCTGTCTTCGGATATTTGGGCTTGGCGGAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGATGTAGCAGTTCCAAGGGTTGCATGGCCCGGAAACAAGTCGAGCGGAACAGATCCGACCCGGGAATGTTCATAGTCACATACACGGCGGAGCACAACCACCCAGCGCCGACTCACCGGAATTCTCTCGCCGGCTCTACCCGTCAAAAGCCCAACACGCAAACGCCGGCTTCCTCCGGATCCGAAAAACCCGACTCGAAGCAGCCCGTTTGCTCGTCGGAAGACCAAAGTACGATCACAGAGAGTAAAGAAGAGAAAGAGGAATTGTTAGCCGAAGATGAAGAAGACGACGATCTGGGTGTCTCCGATTTGATCGTGAACGACGATTTCTATATGGGTTTTGAAGAACTCGACAGCCCAATCACCGACGAGTGTTTTTCCGATCAATTTCCGGCGAATTTCGAGCTTCCATGGTCGTTCAACGGAGACCCAGACAGCGAAATTGTAAAACTCCCCTGGTAA 972 50.62 MEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLLLSSPAAKILTHQKQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPNTQTPASSGSEKPDSKQPVCSSEDQSTITESKEEKEELLAEDEEDDDLGVSDLIVNDDFYMGFEELDSPITDECFSDQFPANFELPWSFNGDPDSEIVKLPW 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14469529 14470705 + Carg20979-RA Car14g01866 161768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01866 323 Pfam WRKY DNA -binding domain 152 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g01866 323 MobiDBLite consensus disorder prediction 201 270 - -
Car14g01866 323 ProSiteProfiles WRKY domain profile. 145 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g01866 323 MobiDBLite consensus disorder prediction 80 97 - -
Car14g01866 323 MobiDBLite consensus disorder prediction 104 127 - -
Car14g01866 323 MobiDBLite consensus disorder prediction 77 142 - -
Car14g01866 323 MobiDBLite consensus disorder prediction 204 247 - -
Car14g01866 323 MobiDBLite consensus disorder prediction 165 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00043 Car-Chr7:292193 Car14g01866 Car-Chr14:14469529 1.03E-37 dispersed
Car14g01866 Car-Chr14:14469529 Car18g00494 Car-Chr18:3548231 1.48E-38 dispersed
Car14g01866 Car-Chr14:14469529 Car15g00988 Car-Chr15:7577166 2.02E-42 wgd
Car14g01866 Car-Chr14:14469529 Car02g00825 Car-Chr2:5964206 2.80E-47 wgd
Car14g01866 Car-Chr14:14469529 Car06g00922 Car-Chr6:7155072 8.43E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4759 PF03106 WRKY 3.10E-18 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01866 K13425 - csv:101217082 457.988