Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01916 ATGAAGATTGAAGATGGGTTGCGGAGTGTTGGTGGGAAGGATGAGGATAAGACAGTGGTTGCTGCTGTTTTGGGGACTCGGGCTTTTAATTACTTGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAACGAGGCGAATTTGCAGAACAAGCTGTCGGATCTGGTGGAGAGACCCAACGCTTCGAATTTTAGCTGGAACTATGCAATTTTCTGGCAACTTTCCCATTCAAATTCTGGGGACTGGGTTTTGGGATGGGGAGATGGATTGTGTAGAGATCCTAGGGAAGGAGAGGAAACGGAAGCTACACAGATTCTTAGTCTTCGGCTTGAAGACGAGAGCCAACAGAGGATGAAGAAAACAGCACTGCAGAAGCTTCACACGCTGTTTGGAGGCTCTGATGAGGACAATTACGCCCTTGGATTGGACAGAGTCACTGATACTGAGATGTTTTTTCTTGCTTCCATGTATTTCTCCTTCCCTAGTGGAGAGGGGGGCCCTGGGAAGTGTTTGGCGTCCAGGAAACATATCTGGCTTTTGGATGTGCTCAATTCGCCATCGGAGTATTGTGTGAGATCGTATCTGGCAAAATCCGCCGGGATTCGGACGGTTGTTCTGGTGCCAACCGATGTCGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTGGTGCAGTTGGTTAGATCATTGTTTTCATCCCAACCTTCCCTCGACCGAGTGAGGTCGTCGGCAACAATGTCCATGATGGCTGAAAGAAAAGATGAAAACGCCCCATTTGTGAGTTTGGGAATTGCTGAAAGAGGAGGGGGGAATCCTAAGGTTTTTGGGCAGACTTTGAACTCGGGGAACCTGGGTCGATCTCATTTCAGAGAGAAACTGGCGATTAGGAAGATGGATGATAGGTCATGGGAAGCATGTGCCAATGGAGGTAGAATTCAGTTTCAAAGCCCCCGAAATGGCCTTCGCAGTCCGAGTTTGGCACATGTTCATGGTCTCAAGCAAGGGAACACTACAGAAGTTTATGGCTCTCCAACTCCACCAGCAAATAATAATCACGAGCAGCTAGTCAATGGAGTTAGAGATGAATATTGTCTCAATCCCTATCAGTCGCAAAAGCTGGCCCAAATGCAAATTGATTTTTCTGGAGCAACATCGAGGCCTTCTGTGATTAACCGTGTAGGTGTGGATTCGGAGCATTCAGATGTAGAGCCTCAATGCAAAGAAGAGGGGCCTGGCACCGATGAAAGACGACCTCGCAAACGAGGCAGAAAGCCTGCAAATGGCAGGGAGGAACCACTGAATCACGTTGAGGCAGAGAGGCAGCGCCGTGAAAAGTTGAACCAACGGTTCTATGCTTTACGAGCTGTTGTGCCCAATATCTCGAAAATGGACAAAGCTTCATTGCTGGGAGATGCCATTGCTTACATTAACGAGCTTCAAACAAAAGTGAAGGCCATGGAAGTTGAACGTGAGAAATCGGGGGTCACCTCAAGTGAAGCAACCCCGTCGGAGGTGAACCCAGAAATTGAAAAGAAAGACCAATTCCTTGATGTCGATATCGACATTGAAGCTGGTCATGACGAAGTGATCGTGAAGGTTAGCTGCCCATTAGAGTCACATCCTGCATCAAGAGTAATCAAGGCCATGAAAGAGGCTCAGATCAACGTTGTTGATTCAAAACTGTGTGAAGCAAATGATACGGTCGTGCACACATTTGTGATAAAGTCTCCGGGATCGGAGCAGTTGACGAAGGAACAGTTGATAGCTGCATTTTCCCGGGACTCGACTCCGTTACACCCTCCGCTATCAACAGTTGGGTAA 1848 47.67 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNEANLQNKLSDLVERPNASNFSWNYAIFWQLSHSNSGDWVLGWGDGLCRDPREGEETEATQILSLRLEDESQQRMKKTALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPSGEGGPGKCLASRKHIWLLDVLNSPSEYCVRSYLAKSAGIRTVVLVPTDVGVVELGSVRSVSESLELVQLVRSLFSSQPSLDRVRSSATMSMMAERKDENAPFVSLGIAERGGGNPKVFGQTLNSGNLGRSHFREKLAIRKMDDRSWEACANGGRIQFQSPRNGLRSPSLAHVHGLKQGNTTEVYGSPTPPANNNHEQLVNGVRDEYCLNPYQSQKLAQMQIDFSGATSRPSVINRVGVDSEHSDVEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQTKVKAMEVEREKSGVTSSEATPSEVNPEIEKKDQFLDVDIDIEAGHDEVIVKVSCPLESHPASRVIKAMKEAQINVVDSKLCEANDTVVHTFVIKSPGSEQLTKEQLIAAFSRDSTPLHPPLSTVG 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14708829 14710676 - Carg25701-RA Car14g01916 161818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01916 615 Gene3D - 432 502 IPR036638 GO:0046983
Car14g01916 615 MobiDBLite consensus disorder prediction 402 450 - -
Car14g01916 615 Pfam Helix-loop-helix DNA-binding domain 443 489 IPR011598 GO:0046983
Car14g01916 615 MobiDBLite consensus disorder prediction 405 450 - -
Car14g01916 615 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Car14g01916 615 SMART finulus 445 494 IPR011598 GO:0046983
Car14g01916 615 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 439 488 IPR011598 GO:0046983
Car14g01916 615 PANTHER TRANSCRIPTION FACTOR MTB1 13 608 - -
Car14g01916 615 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 442 501 IPR036638 GO:0046983
Car14g01916 615 PANTHER MYC 13 608 IPR045084 GO:0003700|GO:0006355
Car14g01916 615 CDD bHLH_AtAIB_like 436 509 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00850 Car14g01916 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01916 Car-Chr14:14708829 Car16g01097 Car-Chr16:9398140 1.99E-73 dispersed
Car02g01549 Car-Chr2:9976687 Car14g01916 Car-Chr14:14708829 1.22E-06 transposed
Car14g01916 Car-Chr14:14708829 Car06g00850 Car-Chr6:6669385 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4764 PF14215 bHLH-MYC_N 1.90E-53 CL0161 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01916 - - csv:101208845 1067.76