Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01923 ATGGAGTCTCTTGATACTGCTGCCGAGAAGGATCCAACCGGTCGATACGTTCGGTTCGATGAAATCGTGGGAAGGGGCGCTTTCAAGACAGTTTACAAGGCATTTGACGAAATTGATGGCATTGAAGTTGCCTGGAACCAAGTAAGGATTGATGGTTTCCTGCAGTCTCCTGAGGATTTGGAAAAGTTGTACTCCGAAGTACTTTTACTTAAATCATTAAGACATGAGAACATTATCAAGTTCTACAATTCTTGGGTGGATGATAAGAAGAAAACAGTCAACATTATTACTGAGCTCTTCACATCTGGGAATTTGAGACAATACCGTAAGAAGCACAAACATGTTAATATGAAGGCCATAAAGAATTGGGCGCGACAGATTCTCCGAGGCCTGGACTATCTTCACAGTCACAATCCTCCCATTATTCATAGAGATTTGAAAGGTGATAATATTTTTATTAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGCTATTATTTTGAAGCAGCCTACTGCTCGAAGTGTGATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTATTGATGTATATGCTTTTGGGATGTGCATGCTGGAGATGGTTACGTTTGAGTATCCTTATAGTGAATGTAAAAATCCGGCTCAGATCTTCAAGAAAGTTACATCTGGTATTAAACCTGCTTCCCTTGATAAGGTGAGTGATCCACAAACCAAGGAGTTCATCAATAAATGTTTGGTTCCGGTGCAAGATAGGTTGTCTGCAAAAGAGCTGCTTAAAGATTCATTCCTTCAAGTTGAGAACCCCAAGGAATCAACGCATGATCTCCTACAGTTACCTAACCATGTTCCTAAATCAATAAATTTGCCAAAGAGTGAACCTATTGACATTGACCTCAAACAACATTCTATGACCACCAGTGCTGAAAGCAATAGTGGGAGTCCACTGTTTCCAGACATGGAATTCCAGACTATGAACAAGAACAATGAGTTTAGGTTACGTGGAAATAAAACCGACGACAACTCGGTGGTGTTAACCTTGCGTATTGCAGACTCGAACGGTCGAGTGAGGAATATACATTTTACGTTTTATCTTGATTCTGATACTGCACTATCAGTGGCAGCTGAAATGGCTGAACAATTGGAGTTGGAAAATCATGATGTTGATTTCGTAGCTGAACTTATTGACTTATTGATAACAAAACTGGTACCTGGTTGGAAGCCGATGTTTGATTATTCCTTAAATGGAGAGTTAAGTCTTTGTGGCGGCCCCCCTACCCTTTTAAGTGCCAAATCATCTATTGCATCTCCATGGGATTCAATGTTAAATGGGGTGGATGATGGTCTGCAATCTAATGGAGATGGTGGCTGGGCTGATGATATTCCCGGTAGTCAAATTTTTGATACTTGCCCTTCTTCTCCCAGCTTCGCTAAGTTTGAGGACCTGAGTTCTCATACTTCATTCGCATCAGAGTTATTGGTCAAAGACTGTTCGACCAAAAGTGCTAAGGTGATGGATTGTTCGAATATTGTTGATGGAAGCTCAAAGGGGTCGAGCTGGTCGGCAGCGGAACTAGAGCTCCAAGGTGCATCAGATGTTGGAAAGTTGAATCCCATGGATTATTTTGTGAAGAACTCAGTGATGTCGTTGGCAAATGAAGCAGCAGCTAATGTGATGAGCTTGACGAGCAGTTGCTCTTCGCTATCCTTAACGGACAAGGATCTGGATGCCGAACTGGAGATGGAACTTGATGCTATTGAGAGACATTATCAGCAGCTGGTGGAGGAGCTGTCTCGAATGAGAGAGGAGGCAGTAGAGGCCACCAGAAAGAGATGGATTGCAAAGAAGAAGCTGACTCATTGA 1893 42.16 MESLDTAAEKDPTGRYVRFDEIVGRGAFKTVYKAFDEIDGIEVAWNQVRIDGFLQSPEDLEKLYSEVLLLKSLRHENIIKFYNSWVDDKKKTVNIITELFTSGNLRQYRKKHKHVNMKAIKNWARQILRGLDYLHSHNPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIILKQPTARSVIGTPEFMAPELYEEEYNELIDVYAFGMCMLEMVTFEYPYSECKNPAQIFKKVTSGIKPASLDKVSDPQTKEFINKCLVPVQDRLSAKELLKDSFLQVENPKESTHDLLQLPNHVPKSINLPKSEPIDIDLKQHSMTTSAESNSGSPLFPDMEFQTMNKNNEFRLRGNKTDDNSVVLTLRIADSNGRVRNIHFTFYLDSDTALSVAAEMAEQLELENHDVDFVAELIDLLITKLVPGWKPMFDYSLNGELSLCGGPPTLLSAKSSIASPWDSMLNGVDDGLQSNGDGGWADDIPGSQIFDTCPSSPSFAKFEDLSSHTSFASELLVKDCSTKSAKVMDCSNIVDGSSKGSSWSAAELELQGASDVGKLNPMDYFVKNSVMSLANEAAANVMSLTSSCSSLSLTDKDLDAELEMELDAIERHYQQLVEELSRMREEAVEATRKRWIAKKKLTH 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14738010 14741214 + Carg25709-RA Car14g01923 161825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01923 630 Coils Coil 586 620 - -
Car14g01923 630 CDD STKc_WNK 15 274 - -
Car14g01923 630 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Car14g01923 630 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Car14g01923 630 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01923 630 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01923 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 628 - -
Car14g01923 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Car14g01923 630 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 355 409 IPR024678 GO:0004674|GO:0005524
Car14g01923 630 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01923 630 Gene3D - 351 421 - -
Car14g01923 630 PANTHER KINASE DOMAIN PROTEIN 4 628 - -
Car14g01923 630 SUPERFAMILY Protein kinase-like (PK-like) 18 320 IPR011009 -
Car14g01923 630 CDD bZIP 583 613 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01923 Car-Chr14:14738010 Car15g01179 Car-Chr15:9208157 1.54E-177 dispersed
Car14g01923 Car-Chr14:14738010 Car02g00684 Car-Chr2:5090692 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89366 PF00069 Pkinase 1.60E-52 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01923 K08867 - csv:101204101 1001.12