Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00079 ATGGGTATGTGTAATGAGAAACTTGTGGGCTTTTTGAACAATAGGTGGTTGGTTTTTGTGGCTGCAATATGGGTTCAATCTTGCGCGGGAATCGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAGTCAGAGGCAAATTGCGCGGCTCGGTGTGGCGAAAGACCTTGGGGATAGTGTCGGTACTCTAGCTGGAACCTTGTTGGAGATATTGCCCTTCTGGGCAACTCTGTTGGTCGGTGCTATCAGTAACTTTGTCGGGTATGGTTGGATTTGGCTCATCGTCACTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTGTGGGAACGAATGGGGAGACTTACTTCAATACAGTTTCTCTGGTTTCTTGCGTACAAAACTTTCCAAAAAGCAGGGGTCCTGTGGTTGGGATTTTGAAAGGCTTTGCTGGTTTAAGCGGTGCAATCTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCGATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGCTTGATGTTTTTTATCAAACCTGTTGCCGGCCATAGGCAAGTGCGGCAGTCTGACGCCATGAGCTTTACTACTGTTTATGGCGTCTGCCTCCTCTTGGCTGCATATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCTCCACTGTGATAGCCATTTTTACCGCTGTTATGTTTGTCATCCTTCTTATTCCCTTCTTGATTCCGGTGGCGTCGACTTTGAGCTCAGAGACAACAACATATGCTGAGCAAGAGGCTCTCCTACAAACGTTACACAGACAGGAACCTGCTACATCTGAAGCAGATGGTAATGAAGTGATATTAAGTGAGGTGGAAGATGAAAAATCAGAGGTAGAGGACTCAGTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTGCAGAGGAGGAAGGGTCCACGTAGAGGGGAAGATTTCACCTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTCTCTCCCATCTCCTTGGTTCTGGGACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCGAGTCCTTAGGCTATGATAATACACATATTTTTGTGTCCCTCATCAGCATATGGAACTTCCTCGGCCGTGTTGGTGGTGGCTACCTCTCTGAGATTGCTGTAAGAGATTATGCTTATCCAAGACCTATTGCAATGGCGATTGCGCAACTCCTTATGATATTCGGACATCTCTTCATCGGAATGGGATGGCCTGGAGCAATGTACATTGGAACTCTCATAACAGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGGTTGAAAAAGTTTGCTGCTTTATACAACTTCATCACTCTCTCTACTCCCATGGGATCTTTGATATTTTCTGGGTTAATCACGAGCAGCATCTATGATAAGGAAGCAGAGAAGCAAGCTCTCAATCATCTCTCACAGCTGCAGAGCTCCAATGGACCGCTCAAGTGCGTGGGCACCATATGCTTCTCTCTAACTTGTATGATAATGGCTGTTTTCTGCGCCATTGCAGGCATCTTAAGTTTGGTTTTGGTTCACCGCACCAGGGGTGTTTACTACAACCTCTATGGAAAATCTCGTTCATCCACGCTTTGTGTAAATTAG 1767 46.18 MGMCNEKLVGFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYSQRQIARLGVAKDLGDSVGTLAGTLLEILPFWATLLVGAISNFVGYGWIWLIVTGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSADLIFMIAVGPALVAIGLMFFIKPVAGHRQVRQSDAMSFTTVYGVCLLLAAYLMGVMLVEDLVTLSSTVIAIFTAVMFVILLIPFLIPVASTLSSETTTYAEQEALLQTLHRQEPATSEADGNEVILSEVEDEKSEVEDSVPASERQKRIAQLQAKLLQAAAEGAVRVQRRKGPRRGEDFTLGQALIKADFWLIFLSHLLGSGTGLTVIDNLGQMSESLGYDNTHIFVSLISIWNFLGRVGGGYLSEIAVRDYAYPRPIAMAIAQLLMIFGHLFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFAALYNFITLSTPMGSLIFSGLITSSIYDKEAEKQALNHLSQLQSSNGPLKCVGTICFSLTCMIMAVFCAIAGILSLVLVHRTRGVYYNLYGKSRSSTLCVN 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 480618 483290 + Carg24281-RA Car15g00079 161916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00079 588 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Car15g00079 588 Coils Coil 300 336 - -
Car15g00079 588 Pfam Nodulin-like 15 262 IPR010658 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02866 Car15g00079 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00144 Car-Chr1:743951 Car15g00079 Car-Chr15:480618 3.20E-117 dispersed
Car14g01199 Car-Chr14:10478740 Car15g00079 Car-Chr15:480618 2.88E-117 dispersed
Car15g00079 Car-Chr15:480618 Car20g00663 Car-Chr20:3738659 5.00E-117 dispersed
Car16g00615 Car-Chr16:3939831 Car15g00079 Car-Chr15:480618 2.40E-81 dispersed
Car15g00079 Car-Chr15:480618 Car04g02866 Car-Chr4:21678350 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00079 - - csv:101211655 986.097