Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00080 ATGGCCATGGGAGCTTTGTGGAGGGCTTTGATTCTGGCTGTGCTTCTTGTGGCGGCTACTACTGTCCAGACAACAGACGCACAATTAGTAGAGAATTTCTACGCCTCCACTTGTCCCAACGTGGAGCAGATCGTTACACAAGCTGTTCAAAACAAGTTTGATCAAACGTTCGTTACCGTCCCTGCAACTTTGCGACTCTTCTTCCATGATTGTTTCGTTGAGGGTTGTGATGCTTCGGTGTTGATAGCATCTCCAAATGGGGATGCAGAGAAAGATGCTAAAGACAATATTTCATTAGCTGGAGATGGATTTGACACGGTTGTTAAAGCTAAGCAAGCGGTTGAAAGTGCTTGTCCCGGTGTTGTCTCTTGTGCTGACGTTTTGGCTCTCGCAACTAGAGATGTCGTTAATTTGGCAGGGGGCCCACTGTACAGCGTGGAACTAGGACGTCGAGATGGGCTAATTTCCCGAGCATCCCGAGTGGCCGGAAACTTACCGGAGCCATTCTTCGATCTGGACCAACTGGTCAACATGTTCGCCGCCCACAACCTGACCCTCATCGACATGATCGCACTCTCCGGAGCCCACACCTTGGGCTTCTCCCACTGTGACCGTTTCTCCAACCGTCTCTACTCCTTTTCCCCTTCGTCTCCGGTGGACCCGTCGTTGGACCCCGGCTACGCGCAGCAGCTAATGGATGCGTGTCCGCGGAACGTGGATCCCAGCATAGCCATAGACATGGATCCTATAACCCCTCGGACCTTCGACAACGTTTACTACCAGAACCTTATCGCCGGCAAGGGCCTCTTCACTGCCGACCAGATTCTGTTCACGGAGTCCGAATCCCAGCCGACAGTCCGCAGCTTCGCCACCAATGGGGCGGAGTTTAATGCGGCGTTTATCAACGCCATGACCAAGATGGGTCGGATTGGAGTTAAGACTGGTAATGATGGTGAAATTCGAATCGATTGCAGTGCCTTTAATTCCTAA 990 51.82 MAMGALWRALILAVLLVAATTVQTTDAQLVENFYASTCPNVEQIVTQAVQNKFDQTFVTVPATLRLFFHDCFVEGCDASVLIASPNGDAEKDAKDNISLAGDGFDTVVKAKQAVESACPGVVSCADVLALATRDVVNLAGGPLYSVELGRRDGLISRASRVAGNLPEPFFDLDQLVNMFAAHNLTLIDMIALSGAHTLGFSHCDRFSNRLYSFSPSSPVDPSLDPGYAQQLMDACPRNVDPSIAIDMDPITPRTFDNVYYQNLIAGKGLFTADQILFTESESQPTVRSFATNGAEFNAAFINAMTKMGRIGVKTGNDGEIRIDCSAFNS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 483529 484751 - Carg24280-RA Car15g00080 161917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00080 329 Pfam Peroxidase 46 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car15g00080 329 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Car15g00080 329 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car15g00080 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02865 Car15g00080 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00841 Car-Chr3:6803952 Car15g00080 Car-Chr15:483529 4.09E-150 dispersed
Car15g00080 Car-Chr15:483529 Car20g00854 Car-Chr20:6624753 4.27E-147 dispersed
Car18g00374 Car-Chr18:2301922 Car15g00080 Car-Chr15:483529 3.45E-97 transposed
Car15g00080 Car-Chr15:483529 Car04g02865 Car-Chr4:21676783 1.84E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00080 K00430 - csv:101213580 550.821