Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00084 ATGGAGGAAAATTCCAGCCTTGTCGCAGAATCAACTCTCACAGACGCCATGGAAGCAGAGCCTCAAGAAGAAGAAAGAGACCCAGAAAGCAATCCCTTGAACGAACCCCTTCTCAAGAGAAGCAGAACTCTCTCTTCTAGTCCTCTTGCCATTGTTGGAGCCAAGGTTTCTCTGATTGAAAGCTTGGATTACGAGATCAATGAGAACGATCTGTTTAAGCACGATTGGAGAAGCAGATCCAAAGTTCAAGTGTTGCAGTACATATTCTCCAAATGGACATTGGCTTGTCTTGTCGGGCTTCTTACAGGGATCATTGCCACTCTCATCAATCTCGCCATTGAAAATATTGCTGGCTACAAGCTTTTGAAAGTGGTCGGTTACATCAAAGAAGAAAGGTACCTAATGGGATTCGCCTACTTTACCACTGCAAATTTCCTTCTCACTTTTGTTGCTGCTGTTCTCTGTGTATGCTTTGCTCCCACCGCCGCTGGGCCTGGCATACCAGAAATCAAAGCCTATCTCAATGGCATAGATACTCCTAATATGTTCGGCGCCACCACGTTGATCGTTAAGATTATTGGGAGCATTGGAGCAGTGGCTGCTGGGCTAGATCTTGGGAAAGAAGGGCCTCTAGTACACATTGGCAGCTGCATTGCTTCTTTACTTGGACAGGGCGGTCCGGATAACTATCGAGTCAAATGGACATGGCTACGCTATTTCAACAACGATCGTGATCGTCGGGATCTTATCACATGCGGGGCGTCATCAGGGGTTTGTGCAGCTTTCCGAGCCCCGGTCGGGGGTGTTCTATTTGCCCTAGAAGAGGTGGCTACATGGTGGAGGAGTGCCCTGCTGTGGAGGACCTTTTTCAGCACAGCCATTGTTGTGGTGGTGCTAAGAACTTTCATTGAAATATGCAAGGCAGGTGAGTGTGGGCTGTTCGGAGAAGGAGGGCTTATTATGTTTGATGTCAGTAGTGTTTCTGTTAGCTACCATATCATGGATATCATACCAGTTGCTATCATTGGCCTTCTTGGTGGGTTCCTTGGAAGCCTTTACAATCATCTTCTGCACAAAATCCTCAGAGTTTACAACCTCATCAATCAGAAGGGAAAAATGCACAAACTGTTACTGAGCTTAGGAGTATCACTCTTCACTTCAATCTGCCAATACAGTCTGCCATACCTTGGCCAATGCACCCCCTGCAACCCTTCTTTTCCAGGTTCCGCCTGCCCCACCAATGGCCGCTCCGGCAACTTCAAGCAATTCAACTGTCCTAAAGGCCATTACAACGACCTCGCCACCCTTCTCCTCGCCACCAACGACGACGCCGTTCGAAACATCTTCTCCACCAACACTTCCACCGAGTACCAGCCCCTTTCCCTCGTCATCTTCTTCCTCCTCTACTGCGTCTTAGGGCTTATCACTTTCGGCATCGCCGTCCCCTCCGGTCTCTTCCTTCCGATCATTTTGATGGGCTCTGGCTATGGCCGTCTCATCGGCCTCCTCATGCGGCCCTACTCCGATCTCGATCAGGGACTTTTGGCTGTTCTCGGTGCTGCCTCCTTAATGGCGGGCTCCATGCGGATGACCGTTTCCCTCTGCGTTATATTCCTGGAGCTCACCAACAATCTCCTTCTACTTCCGATTACGATGATTGTCCTTCTGATTGGAAAAACCGTCGGGGACTGTTTTAACCCTAGTATTTATGACATCATTCTACATCTGAAGGGGCTTCCGTTCTTGGACGCGAATCCGGAGACGTGGATGAGGAACATCACGGTAGGCGAACTGGCTGACGCAAAGCCGGCGGTGGTGACGCTGCGGGGATTGGAGAAAGTGTCCCGCATTGTGGAGGTTCTTAAGAACACGACGCATAACGGGTTCCCTGTTGTGGACTCGGACGCAGTGGTGCCGCCAGTGGGGATGGCAGTGGGGGCGACGGAGCTGCACGGGCTAGTGCTGAGAGCGCATTTGCTGCAGGTGCTGAAAAAGAAATGGTTCTTGAGAGAGAAGAGAAGAACAGAGGAATGGGAGGTGAGGGAGAAGTTTACATGGGTGGAATTGGCGGAGAGGGAAGGGAAGATTGAGGAGCTTGCAGTGAAGAAGGAGGAGATGGATATGTACGTTGATCTTCATCCTCTTACCAACACTACGCCTTATACAGTAATGGAGAGCATGTCTGTGGCCAAAGCTCTGGTTCTGTTCCGCCAAGTGGGGCTCCGCCATTTGCTCATCGTGCCCAAGTATGAAGCTGCTGGGGCTCCGCCAGTAATTGGGATTTTGACGAGGCAGGATTTGAGGCCGTACAACATTCTGAGTGCGTTCCCTCATCTTGCCAAGATCAAAGGCAACGAAAAACGGAACTGA 2370 50.25 MEENSSLVAESTLTDAMEAEPQEEERDPESNPLNEPLLKRSRTLSSSPLAIVGAKVSLIESLDYEINENDLFKHDWRSRSKVQVLQYIFSKWTLACLVGLLTGIIATLINLAIENIAGYKLLKVVGYIKEERYLMGFAYFTTANFLLTFVAAVLCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRVKWTWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAIVVVVLRTFIEICKAGECGLFGEGGLIMFDVSSVSVSYHIMDIIPVAIIGLLGGFLGSLYNHLLHKILRVYNLINQKGKMHKLLLSLGVSLFTSICQYSLPYLGQCTPCNPSFPGSACPTNGRSGNFKQFNCPKGHYNDLATLLLATNDDAVRNIFSTNTSTEYQPLSLVIFFLLYCVLGLITFGIAVPSGLFLPIILMGSGYGRLIGLLMRPYSDLDQGLLAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIGKTVGDCFNPSIYDIILHLKGLPFLDANPETWMRNITVGELADAKPAVVTLRGLEKVSRIVEVLKNTTHNGFPVVDSDAVVPPVGMAVGATELHGLVLRAHLLQVLKKKWFLREKRRTEEWEVREKFTWVELAEREGKIEELAVKKEEMDMYVDLHPLTNTTPYTVMESMSVAKALVLFRQVGLRHLLIVPKYEAAGAPPVIGILTRQDLRPYNILSAFPHLAKIKGNEKRN 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 497110 500297 + Carg24276-RA Car15g00084 161921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00084 789 ProSiteProfiles CBS domain profile. 716 781 IPR000644 -
Car15g00084 789 MobiDBLite consensus disorder prediction 1 36 - -
Car15g00084 789 Pfam CBS domain 718 768 IPR000644 -
Car15g00084 789 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02848 Car-Chr4:21611107 Car15g00084 Car-Chr15:497110 0 dispersed
Car04g02849 Car-Chr4:21612634 Car15g00084 Car-Chr15:497110 0 dispersed
Car12g01158 Car-Chr12:11153212 Car15g00084 Car-Chr15:497110 0 dispersed
Car15g00084 Car-Chr15:497110 Car17g00224 Car-Chr17:1381171 7.55E-58 dispersed
Car15g00084 Car-Chr15:497110 Car16g00792 Car-Chr16:5197673 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00084 K05016 - csv:101210008 1442.17