Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00097 ATAAAAACAAAAAAAAAAACAAAAAAAAGATCGTCCGTCTGCAGTCTGCACGGTGCCACTTCTTCCCCATTCTCCGGCCGACGGCTTCTCCGACCACCACTGTCACCCTCCTCTCTTCCTAAACTTGATTTGTCTGTCACAGATCCGAACAACAACCGGGAAGACAGAGTGGCAGAATTTCTAGAAGCCGGAGGTTTCGCGGCCGAGGAGTTCTCAGAACAACAAGGCATTGCAATATGTCGTCTAAGAATCAGAAGAATGGTCTGCACTGCCAAAGCCCGATCTCTTCAACATGCCGTACGCATGGTCAACGGCGTCAAACGAGTACTCATCGGTCCCGGAATAGATGAAGCCAAAATCTTCTTCGATCCAAATTTGACCACTGAAGCCGAAATCCTCGCTGCCACCAATGATTCCGGCTTCGAATCCGAGCTCATCTCCGCCGCAGACGAGGCCTACAAAGTTCATATAAAACTCGATCAAGTTGGCCCTGCGGACATGACCGCCATAAGAACCTCTCTCGAGCAAGCTTCTGGAGTGAACTCTGTTGAAATGGATGGGCTAGGGCAGATGGTTTCCATCCACTATGACCCTGACCGGACTGGTCCGAGGTCTCTTTTGCAGTGCCTCAAGAGCTACGGAGCGAGTTTGTATGTGCCACCGAAGAGAAGAGATGTGGAGCAGCATCAAGAAGCTTGTACTTATAGGAACTTGTTCTTGTTCAGCTGCTTGTTTTCTGTTCCTGTGGTGGCTTTTGCAATGGTGCTCCCTATGCTTCCTCCTTATGGGGAGTGGTTGAATTTTAGGGTTTACAATATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACACCAGTCCAGTTCTTTGCTGGCCGGAGATTTTATGTAGGATCATACCGAGCATTACAACAGAAATCAGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCATACTTTTACTCAGTATACATAGTATTTAAAGCATCCACTTCCAACTCTTTTAGAGGGAAAGATTTCTTTGAGTTTAGCTCCATGTTGATCTCCTTCATTCAACTTGGAAAGTATTTGGAGGTCATGGCCAAAGGGAAATCATCAGATGCTTTAGCAAAGCTTGCTCATCTTGCTCCTCATACCGCTTGTTTGATGACCTTTGATGATCATGGAAATTTGCTATCAGAGATGGAGATTGATACCCAGTTGATACAGAGGAATGATATCATTAAGATTGTTGCTGGGGCAAAAGTTCCTGTTGATGGAATTGTTATTAGTGGTGAAAGCAATGTGAATGAGAGTACAATTACTGGAGAAGCAAGATCCATTGCGAAAACACCCGGTGATAAGGTTATTGGCGGGACTGTCAATGAAAATGGATGCTTATTTATTAAGACCACACATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTAGTGGAATCAGCTCAGCTATCACGAGCACCGGCTCAAAAATTAGCAGACCGGATATCAAAGTTTTTTGTTCCTGTTGTTGTTGTGGCAGCATTTGTGACATGGCTTGGTTGGTTAATTTGTGGGGAAGCTGGTTTGTACCCTAAACATTTTATTCCAAAGGGCATGGATGAGTTTGAACTTGCACTGCAATTTGGCATTTCAGTGCTGGTGATCGCGTGCCCATGTGCCCTTGGTTTAGCAACACCAACTGCTATCATGGTTGCATCAGGGAAGGGTGCTTCTCTTGGTGTCCTCATTAAGGGAGCAAGTGCACTTCAAAATGCATACAAGGTGAAAATGGTAGTTTTCGACAAGACTGGAACTCTAACGGTTGGCAGGCCAGAGGTTGTTAGTGTTGTGCTTTTTTCTACATTTCCAATGCAGGAGCTCTGCGATGTAGCAATAGCAATTGAGTCAAACAGCAAACACCCTTTAGCAAAATGTGTAGTGGATCATGCAATGAAAATGAGAAAAAAGTTTGGGGCCCGAACCGAATGTCGCAAACGCATACAGAACTTTGAGGTGTTCCCGGGAGGAGGGGTTGGAGGAAAAATTGATAGAAAACCAGTTTTAGTAGGAAACCGAAGGCTCATGCGAGCTCACAACATTGTTGTTGGTCCTCAAGTTGATCGTTATGTTATAGAAAATGAGCGGCTGGCTCAAACATGTATATTAGTGGCTATAAATGGCAGGATAGCTGGAGGTTTTGGTGTTATAGATGCGCCAAAGTCTGGGACTAAAGCTGTTATATCGTATCTTCGCTCAATCGGCATCTCAAGCATAATGGTCACTGGCGATAACTGGGCCACAGCATTTGCCGTTGCAAGAGGGGTTGGGATCAATGAGGTCTTTGCAGAGATGGATCCAATTGGAAAAGCTAACAAGATCAAATCCTTAAAGACAACAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAACGACTCGCATGCCTTAGCTGCAGCTGATGTTGGCATTGCCATTGGTGCTGGAACAAATATTGCTATAGAAGCAGCTGATATAGTTCTCATGCGAAGCAATTTAGAAGATGTAGTTACAGCCATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATCTGGGCACTTGGCTATAATATTATAGGTATGCCTATTGCTGCCGGAATCTTATATCCCTTTACTGGAATCCGATTGCCGCCGTGGCTCGCCGGTGCCTGCATGGCTGCTTCCTCCCTTAGCGTCGTATGTTCTTCTCTCTTATTGAAATGCTATAGGAGACCCTTGAATTTTCAATCCACT 2778 44.67 IKTKKKTKKRSSVCSLHGATSSPFSGRRLLRPPLSPSSLPKLDLSVTDPNNNREDRVAEFLEAGGFAAEEFSEQQGIAICRLRIRRMVCTAKARSLQHAVRMVNGVKRVLIGPGIDEAKIFFDPNLTTEAEILAATNDSGFESELISAADEAYKVHIKLDQVGPADMTAIRTSLEQASGVNSVEMDGLGQMVSIHYDPDRTGPRSLLQCLKSYGASLYVPPKRRDVEQHQEACTYRNLFLFSCLFSVPVVAFAMVLPMLPPYGEWLNFRVYNMLTVGMVLKWIFCTPVQFFAGRRFYVGSYRALQQKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFRGKDFFEFSSMLISFIQLGKYLEVMAKGKSSDALAKLAHLAPHTACLMTFDDHGNLLSEMEIDTQLIQRNDIIKIVAGAKVPVDGIVISGESNVNESTITGEARSIAKTPGDKVIGGTVNENGCLFIKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADRISKFFVPVVVVAAFVTWLGWLICGEAGLYPKHFIPKGMDEFELALQFGISVLVIACPCALGLATPTAIMVASGKGASLGVLIKGASALQNAYKVKMVVFDKTGTLTVGRPEVVSVVLFSTFPMQELCDVAIAIESNSKHPLAKCVVDHAMKMRKKFGARTECRKRIQNFEVFPGGGVGGKIDRKPVLVGNRRLMRAHNIVVGPQVDRYVIENERLAQTCILVAINGRIAGGFGVIDAPKSGTKAVISYLRSIGISSIMVTGDNWATAFAVARGVGINEVFAEMDPIGKANKIKSLKTTGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLKCYRRPLNFQST 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 568053 574083 - Carg24263-RA Car15g00097 161934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00097 926 Pfam E1-E2 ATPase 397 576 - -
Car15g00097 926 Pfam haloacid dehalogenase-like hydrolase 594 819 - -
Car15g00097 926 ProSiteProfiles Heavy-metal-associated domain profile. 79 145 IPR006121 GO:0046872
Car15g00097 926 MobiDBLite consensus disorder prediction 1 50 - -
Car15g00097 926 ProSitePatterns E1-E2 ATPases phosphorylation site. 600 606 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01227 Car-Chr2:8306662 Car15g00097 Car-Chr15:568053 0 dispersed
Car07g01115 Car-Chr7:6658148 Car15g00097 Car-Chr15:568053 0 dispersed
Car09g00315 Car-Chr9:1740732 Car15g00097 Car-Chr15:568053 8.06E-90 dispersed
Car10g00363 Car-Chr10:1793084 Car15g00097 Car-Chr15:568053 2.52E-67 dispersed
Car15g00097 Car-Chr15:568053 Car03g00188 Car-Chr3:3161854 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00097 K17686 - csv:101214276 1397.88