Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00129 ATGGCAAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCTTTAGAGTATAACGAGTCCAAGTTGGCGGCTATTATGGCATCTTTCATCATTCAAAAACCTCGGCAGAGGTCACCTTTTATCAAAGCTGCCCTAAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTGGATATGTATCGTACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAACATAAATGAGGGTGATGCTCACTCAAAGGGATGGCTTGGTTCTAGGACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTCCTAATTTTGAGTGAGAAACTTCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCACGAAGAAAACCAAACCAAATAAATAAACCACGCTCTGCCAATACCTTTGCCTATAATGGTACAGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTCATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAATTTCTTTATGAACAGGCTGTTGAAGCTACGAAGAACGTCGAGCTTGGTAATAAAGAACTTTCCCAAGCAATTCAGCGGAATAGCAGCAGCCGAACCTTCCTTCTTCTATTTCTGTTTGTGCTCACCTTTTCAATTATCTTTCTTGATTGCCAAAAGACTTACTACCCTTCTTCGAGCTATGCTTTCGCCATCAGACTTGTGGCAGATGCAACCGGGAGGAACATTCCTGATCCGTCGTCCTCAAAACTCGACCTCCAACAATTTAACGCAGCTTTTCTTTCATCTCTTTTTGATCGCTGCTCCACCGGAAGATCACAGATTCATGTCCTTCTGCTTCCTCCCACTGCTCCACTTAACTCAACCCTTCATTTCTGTATCAAAAATCACAGCTTTTTGTTTTTTGATCAAAACCCACCTCCCAACATGAAGGGTACGAGTCGTTTCTTCACGATCGGCCTCGTTGCCTCCTGGTACTCCTCCAACATTGGGGTTCTCTTGCTCAACAAGTATTTGCTCAGCAACTATGCTACCTTGCAATTGCTTGGTTTCAAGGTCGTTCCTCTGCAAACACTTCGATCTCGCCTCCAATTCTTTAAGATCTCCGCCCTCAGCTTCATCTTCTGCATCTCCGTTGTCTTCGGCAACATTTCCCTTCGCTATCTTCCCGTCTCTTTCAACCAGGCTGTCGGAGCAACCACGCCCTTTTTCACCGCCGTTTTTGCCTATCTGATGACCTTGAAGAGGGAGGCTTGGCTCACTTATGTTACGCTCATTCCTGTCGTCACCGGAGTTATCATTGCCAGCGGGGGCGAACCCAGTTTCCATCTATTTGGGTTTCTGATATGTATCGCAGCCACCGCTGCAAGAGCTCTCAAATCAGTACTTCAAGCAATTTTGCTTTCTGCAGATGGAGAGAAGCTGAATTCCATGAATCTCCTTTTGTATATGGCCCCAATGGCTGTTGTGTTCTTGCTTCCTGCAACACTTGTTTTGGAAGATAATGTGATTGGTATCACACGGGCACTTGCTATAGATGATATCAAGATCATCTGGTACCTTCTTTTCAATTCGTCACTAGCATATTTCGTAAATCTTTCCAATTTTCTCGTCACAAAACACACCAGTGCGCTCACCCTTCAGGTACTAGGAAATGCCAAAGGGGCAGTGGCTGTCGTTGTCTCCATTTTAATCTTTAGAAACCCTGTGTCCGTTACTGGAATGATGGGTTATACGATGACAGTTATGGGAGTCATTCTCTACAGCCAAGCAAAGAAACGAACAAATAAGAGTTAA 2064 43.56 MAKFRDRTEDFKDVVRHCAISLEYNESKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNNINEGDAHSKGWLGSRTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKPNQINKPRSANTFAYNGTELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDCQKTYYPSSSYAFAIRLVADATGRNIPDPSSSKLDLQQFNAAFLSSLFDRCSTGRSQIHVLLLPPTAPLNSTLHFCIKNHSFLFFDQNPPPNMKGTSRFFTIGLVASWYSSNIGVLLLNKYLLSNYATLQLLGFKVVPLQTLRSRLQFFKISALSFIFCISVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLICIAATAARALKSVLQAILLSADGEKLNSMNLLLYMAPMAVVFLLPATLVLEDNVIGITRALAIDDIKIIWYLLFNSSLAYFVNLSNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTMTVMGVILYSQAKKRTNKS 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 721729 728032 + Carg02109-RA Car15g00129 161966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00129 687 Pfam Triose-phosphate Transporter family 411 678 IPR004853 -
Car15g00129 687 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02811 Car15g00129 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00495 Car-Chr14:2724846 Car15g00129 Car-Chr15:721729 3.37E-130 dispersed
Car04g02811 Car-Chr4:21462640 Car15g00129 Car-Chr15:721729 0 transposed
Car15g00129 Car-Chr15:721729 Car04g02808 Car-Chr4:21454257 0 wgd
Car15g00129 Car-Chr15:721729 Car04g00165 Car-Chr4:900728 2.48E-172 wgd
Car15g00129 Car-Chr15:721729 Car04g01064 Car-Chr4:6086726 1.26E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00129 - K08492 csv:101207161 552.362