Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00137 ATGGTCGATTTGGGTTGGAAGGCCAACATGGTTTCCTCTGACAAGACCACCACTAAATCCCCAAAGCTCATCCCCACCGCCAATCTCAGTCTATCTCTTCCTCTTTCATTTCGTTCTTCAGACATATCCACTGCCTCGCCTTCCTCTTGTTCTTCGTACGACCACTACCTTCGCCTCAACGATCTCAGGAAGCTATGGAGTTCTAAGGAGTTTCCGGAATGGACAAGTGAGTCGGTTTTGAAGCCGGGATTGCAAGCTTTGGAGATTACTTTCCGCTTCATTTCGATCGTCTTGTCCGATCCCCGGCCGTATGTTAACCGCTGGGAGTGGAAGAGGAAGCTTGAGTCTCTCACCACGACTCAGATCCAACTCATTGCTATGATTTTTGAAGACGATGAAGAGGACGACGAAGCGCGCGGCAGAGTTCCGATCGTTGATCTCAGTTCATCCAACGGCGTTATAACTCGCGAGGGAAGCTCGGCGGAGGTCTGGAAGATTCGCGGAGAAGCTACCGTTGTAAGCAGAACAAGTGAATTGAGTCTTCTTCCTCGACTTGCGTCGTGGCAGAGCTCTGAAGATATTGCGCAGATGATTCAGTACTCCGTTGAGTGCGAGATGAGGAGATGTCCGTACACGCTAGGGTTAGGGGAGCCAAATTTGGCCGGCAAGCCGAATATCGACTACGACCAAATTTGCAGGCCGAACGAGCTTCATTCTCTGAGAAAGAATCTGTACGATCAAATTGAAAACTACGAGAATCAAACGGTCTATACAACGCACCAGATCCTGGAGTCGTGGATTTACGCCGCGCATGAGCTTCTGAAACGAATTGCAGAGAGAATCGAGATGAAGAATTTCGCCAAAGCCGCGAAGGATTGCTATCTGATGGAGCGCATCTGGAAGCTTCTACAGGAGATTGAAGATCTTCACCTTCTGATGGACCCGGATGATTTCCTAAAGCTGAAGAATCAATTAGCGATCAAATCGCTGCAGGAATCGGAGGCATTTTGCTTCAGATCGACGACGCTGGTGGAGATTACGAAGCAGTGCAAGGATCTGAAGCACAAGGTGCCGTTCATCTTGGATGTGGAGGTGGATCCAATGGGCGGACCAAGGATTCAAGAGGCGGCGATGAGATTGTACAGCGAGAAGCGAGAGATCGAGAAGATTCATCTGCTTCAAGCCCTGCAATCGATCGAATCGGCGATAAAGAAGTTTTTCTTCGCCTACAAGCAAGTTCTGGTAATGGTGATGGGAAGCTTAGAGGCGAAGGGGAACCGAGTCGTGGTGAGTTCAAACTCGGACGATTCACTGAGTCAAATATTTCTGGAATCCACCTATTTCCCGAGTTTGGATGCTGCCAAGACGTTTCTCGGCGATATGCACAGTGTTTACGGGTCGGATAGGAGGACCCGGATGAAGCTTTAG 1428 49.44 MVDLGWKANMVSSDKTTTKSPKLIPTANLSLSLPLSFRSSDISTASPSSCSSYDHYLRLNDLRKLWSSKEFPEWTSESVLKPGLQALEITFRFISIVLSDPRPYVNRWEWKRKLESLTTTQIQLIAMIFEDDEEDDEARGRVPIVDLSSSNGVITREGSSAEVWKIRGEATVVSRTSELSLLPRLASWQSSEDIAQMIQYSVECEMRRCPYTLGLGEPNLAGKPNIDYDQICRPNELHSLRKNLYDQIENYENQTVYTTHQILESWIYAAHELLKRIAERIEMKNFAKAAKDCYLMERIWKLLQEIEDLHLLMDPDDFLKLKNQLAIKSLQESEAFCFRSTTLVEITKQCKDLKHKVPFILDVEVDPMGGPRIQEAAMRLYSEKREIEKIHLLQALQSIESAIKKFFFAYKQVLVMVMGSLEAKGNRVVVSSNSDDSLSQIFLESTYFPSLDAAKTFLGDMHSVYGSDRRTRMKL 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 755830 757257 - Carg02117-RA Car15g00137 161974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00137 475 Pfam Hs1pro-1 N-terminus 1 203 IPR009869 GO:0006952
Car15g00137 475 Pfam Hs1pro-1 protein C-terminus 206 462 IPR009743 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02801 Car15g00137 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00137 Car-Chr15:755830 Car04g02801 Car-Chr4:21424820 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00137 - - cmo:103485560 827.009