Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00151 ATGAGAGGTTGCCATGAGACTCGCTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTCAAGAGAAGATGCACTCCCACATGTATATTTGCGCCTTATTTTCGGTCTGATGAGCCTAAGAAGTTTGCCAAAGTTCATAAGGTTTTTGGGGCCAGTAATGTGAGCAAGATTCTGACTGAGGTGCCCGAGGAGCAGAGAGAGGACACTGTGAACTCCTTGGCTTATGAGGCTGAGGCCAGGCTGAGGGACCCTGTTTATGGCTGCATCGGTGCCATAGCTCTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCCATTGCCAAAGCTCGTCTTGCTCGTTATGCTGATTCTGATCATAATTATAGCACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGGGTGTTTTGGAAAATTGTGTTGTTAATATGCCTTATGGTGGATTGAGCATCGCTGCAGGGCAGAGCTCTTCCGCAATCACCCAATATGGATATTTATGTGACTTCACCCACTTTCCTTATCCATCTAAAGCTTGA 540 45.37 MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDHNYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 843451 843990 - Carg02132-RA Car15g00151 161988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00151 179 Coils Coil 91 111 - -
Car15g00151 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 138 - -
Car15g00151 179 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Car15g00151 179 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Car15g00151 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 138 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02784 Car15g00151 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00607 Car-Chr14:3379792 Car15g00151 Car-Chr15:843451 7.21E-50 dispersed
Car15g00151 Car-Chr15:843451 Car05g00698 Car-Chr5:4724611 4.19E-49 dispersed
Car15g00151 Car-Chr15:843451 Car04g02784 Car-Chr4:21330378 7.99E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4774 PF03195 LOB 4.80E-39 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00151 - - cpep:111808214 326.25