Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00156 ATGGGTCTCAGTGATCAATATTCTGATGCAATTTCTTTACCTACCAATTCCATTAGGAAGAGGAAGTCACGGAGTAGACGGGATCGATCGACCGTGGCTGAGACGCTCGCTAAGTGGAAGGCTTATAACGAATGTGCTGATTCTTGTAATGATGAAGACAAGCCAATTCGTAAAGCTCCAGCAAAAGGGTCTAAGAAGGGATGTATGAAAGGCAAAGGAGGACCCTTAAATTCGCAATGCAAATATAGAGGTGTGAGGCAGAGAACATGGGGCAAATGGGTTGCAGAGATCCGTGAACCCAACAGAGGGAGTAGGCTGTGGCTTGGTACCTTCCCGACAGCCACCGAAGCTGCCCTTGCCTACGACGAGGCTGCGAGGACGATGTACGGCGAGACAGCTCGTTTAAACCTTCCCAACATTAAAAACAGAGGGCAGCTACAGGGGATTCTTTTGGAGGATTACTTGGGGCTGCGGAACTCTGATTCTTCAACCGCTACTTCCACATGTTCTGGATCGACAATCACGACGTCAAACCAATCTGAGGTCTGTGTGCCTGGGGAGTTCGCACTGTGGCCACCCTCAAATATCAAGATTGAAGATGGAGAAGGCGAGTCGAGGACCTGGGATCACTCCAGTCACGCTCCGACTCCGATGTGCTTAGAGAAGCCAGTGAAACATGAAGATGTAGCTAAATATCTCGAGCATCACAATAATCAAACAGTTCTACCGGATACTGAGTTACCTAGTTGGGATCAGCTGCAGAATTTTCAAATGGACGTGATGTTTGAGCCGAGAATCGGGGATCAGGCCGATGACACTGCGAAGCCGATGAGCATGGAGAAGAAGCAAGTGAAAAATGAAGATAACGATGCTAAACATCTGGATCAGAGAAATGATCAAACAGTCTCATCAGGGACCGAGATTCCTGGTGTGGATGACTTGCAAAACTTCCAGATGGATGAAATGTTCGATGTGGACGAGCTTCTAGGCCTGATAAATGGTGATTGCTTGTATGATCCAAGCATCTTGCAGGGCAATGTAGATGGTTTTAACAGCACAGCGCCCTCCCAAGTTGGCGATCACGGGTCTGAAAAGGCATCAAGTTTGTCATATCAGTTCCAAAACCCCGACGCGAAGCTGCTCGGAAGCCTCCAACACATGAAGCAATCTCCGTCGGATGTCGACTACAGATTTGATTTCTTGAAGCAGGGGAGGGAGGAGGATGTGAATGCCGCAGCAGATGAGTACATAAGATACCTGAATTATGAGATGGATGATATGGGATTTTGA 1290 47.91 MGLSDQYSDAISLPTNSIRKRKSRSRRDRSTVAETLAKWKAYNECADSCNDEDKPIRKAPAKGSKKGCMKGKGGPLNSQCKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTATEAALAYDEAARTMYGETARLNLPNIKNRGQLQGILLEDYLGLRNSDSSTATSTCSGSTITTSNQSEVCVPGEFALWPPSNIKIEDGEGESRTWDHSSHAPTPMCLEKPVKHEDVAKYLEHHNNQTVLPDTELPSWDQLQNFQMDVMFEPRIGDQADDTAKPMSMEKKQVKNEDNDAKHLDQRNDQTVSSGTEIPGVDDLQNFQMDEMFDVDELLGLINGDCLYDPSILQGNVDGFNSTAPSQVGDHGSEKASSLSYQFQNPDAKLLGSLQHMKQSPSDVDYRFDFLKQGREEDVNAAADEYIRYLNYEMDDMGF 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 856532 857821 - Carg02137-RA Car15g00156 161993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00156 429 MobiDBLite consensus disorder prediction 268 297 - -
Car15g00156 429 MobiDBLite consensus disorder prediction 1 30 - -
Car15g00156 429 MobiDBLite consensus disorder prediction 268 312 - -
Car15g00156 429 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Car15g00156 429 MobiDBLite consensus disorder prediction 1 18 - -
Car15g00156 429 Pfam AP2 domain 80 130 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00121 Car15g00156 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00412 Car-Chr14:2099552 Car15g00156 Car-Chr15:856532 5.37E-26 dispersed
Car15g00156 Car-Chr15:856532 Car05g00437 Car-Chr5:2506940 3.13E-25 dispersed
Car15g00156 Car-Chr15:856532 Car04g02781 Car-Chr4:21321142 7.00E-10 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4775 PF00847 AP2 5.80E-15 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00156 - K09286 cpep:111808198 805.438