Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00167 ATGGAATCCCAGATACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCGTCTCCTCGCAATCGTCGCCATCCAATTTCTCCGCCCCCATCAAACCGCGTAAGCGTGTAATTAAATCTGCGGTAAAAGATGTTGTCAACATTCAGAAGAAACGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCAAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAACCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGACTTGTCGTCTAGTTCAGGAACCGATCGCGTTCCGGAGCCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGAGGCTAAATCATCCGACTCGGAGTTCACCTGCCAAAGCCATGGACTTTATAAGAACCCCCCACACTCCCTCCTTCTTCATCAACACTACCCGGAAAATTGTTACAGAGCTTGTGGGTTCTTAGCAATGGCTGATTCAGGATTCAGAGGAGTTTTGATTTTGAGTTTGGGTTTGGGTTTGTTTATGCTCTTTTTGGGCACTGCCTCAGCTCAACTCTCTACTGGTTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACTGTCAAAACCTCTGTTCGATCTGCTGTCTCCAAAGAGGCTCGCATGGGGTCTTCCATTCTTCGCTTGTTTTTTCACGACTGTTTCGTCAATGGATGCGATGGGTCAATTCTGTTGGACGATACGTCGAGCTTCACTGGAGAGAAAAATGCTAACCCGAATCGGAACTCCGCTAGAGGCTTCGATGTCATTGATAACATCAAAACCGCTGTTGAGAATGCTTGCCCTGGCGTTGTTTCCTGTGCTGATATCCTCGCCATTGCTGCTCGTGACTCTGTTGTTCTTAGACGCCACAACCGCGAGCCAGTCCCAAGCCAACAGCGACATCCCCGCGCCAACTTCAACTCTTAG 1224 47.14 MESQIQNLSARKPFSDCTNTIVSSQSSPSNFSAPIKPRKRVIKSAVKDVVNIQKKREPSFASESTSLNLRVSNPSSDFLPTEPSSDFNPAETNPTSDSLPPEPSSRRLPTEASTPSRRTDLSSSSGTDRVPEPQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSEFTCQSHGLYKNPPHSLLLHQHYPENCYRACGFLAMADSGFRGVLILSLGLGLFMLFLGTASAQLSTGFYSSSCPNLLSTVKTSVRSAVSKEARMGSSILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVENACPGVVSCADILAIAARDSVVLRRHNREPVPSQQRHPRANFNS 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 899937 904082 + Carg02148-RA Car15g00167 162004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00167 407 MobiDBLite consensus disorder prediction 1 40 - -
Car15g00167 407 ProSitePatterns Peroxidases active site signature. 308 319 IPR019794 GO:0004601
Car15g00167 407 MobiDBLite consensus disorder prediction 54 144 - -
Car15g00167 407 MobiDBLite consensus disorder prediction 1 33 - -
Car15g00167 407 Pfam Peroxidase 293 388 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car15g00167 407 MobiDBLite consensus disorder prediction 57 132 - -
Car15g00167 407 ProSiteProfiles Plant heme peroxidase family profile. 276 407 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00167 Car-Chr15:899937 Car10g00921 Car-Chr10:6989501 7.41E-52 dispersed
Car15g00167 Car-Chr15:899937 Car04g02765 Car-Chr4:21262210 3.26E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00167 K00430 - csv:101214708 278.485